RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 SPNS3Q6ZMD2 512 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 ZNF841Q6ZN19 808 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 GAFA1Q96PS6 74 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 DAPK2Q9UIK4 370 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 RPS2P15880 293 aaKnown RBP14.9□□□□□ -0.02
CLK2-202ENST00000361168 PRDX2P32119 198 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 QRFPP83859 136 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 LOXL1Q08397 574 aaPredicted RBP14.9□□□□□ -0.02
CLK2-202ENST00000361168 SPCS2Q15005 226 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 DCDC5Q6ZRR9 648 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 OR6M1Q8NGM8 313 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 TBC1D15Q8TC07 691 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 FOXRED1Q96CU9 486 aaPredicted RBP14.9□□□□□ -0.02
CLK2-202ENST00000361168 S100A13Q99584 98 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 BARHL1Q9BZE3 327 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 METTL9Q9H1A3 318 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 PATZ1Q9HBE1 687 aaKnown RBP14.9□□□□□ -0.02
CLK2-202ENST00000361168 RASL12Q9NYN1 266 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 PCDHB10Q9UN67 800 aa14.9□□□□□ -0.02
CLK2-202ENST00000361168 YLPM1P49750 1951 aaKnown RBP14.89□□□□□ -0.03
CLK2-202ENST00000361168 GEMIN2O14893 280 aaKnown RBP14.89□□□□□ -0.03
CLK2-202ENST00000361168 FSTL3O95633 263 aa14.89□□□□□ -0.03
CLK2-202ENST00000361168 PAHP00439 452 aa14.89□□□□□ -0.03
CLK2-202ENST00000361168 SERPINB10P48595 397 aa14.89□□□□□ -0.03
CLK2-202ENST00000361168 FGF12P61328 243 aa14.89□□□□□ -0.03
CLK2-202ENST00000361168 SCN1BQ07699 218 aa14.89□□□□□ -0.03
CLK2-202ENST00000361168 BLMHQ13867 455 aa14.89□□□□□ -0.03
CLK2-202ENST00000361168 ELP2Q6IA86 826 aa14.89□□□□□ -0.03
CLK2-202ENST00000361168 SFXN4Q6P4A7 337 aa14.89□□□□□ -0.03
CLK2-202ENST00000361168 ZNF788Q6ZQV5 615 aa14.89□□□□□ -0.03
CLK2-202ENST00000361168 RTN4RL2Q86UN3 420 aa14.89□□□□□ -0.03
CLK2-202ENST00000361168 MUC20Q8N307 709 aaPredicted RBP14.89□□□□□ -0.03
CLK2-202ENST00000361168 SPICQ8N5J4 248 aa14.89□□□□□ -0.03
CLK2-202ENST00000361168 Q8NFD4 153 aa14.89□□□□□ -0.03
CLK2-202ENST00000361168 C12orf43Q96C57 262 aaKnown RBP14.89□□□□□ -0.03
CLK2-202ENST00000361168 LIN7BQ9HAP6 207 aa14.89□□□□□ -0.03
CLK2-202ENST00000361168 CUBNO60494 3623 aa14.89□□□□□ -0.03
CLK2-202ENST00000361168 PDCD5O14737 125 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 CRTAPO75718 401 aaPredicted RBP14.88□□□□□ -0.03
CLK2-202ENST00000361168 KNG1P01042 644 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 ZNF146Q15072 292 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 RAB11BQ15907 218 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 C2orf76Q3KRA6 126 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 BRICD5Q6PL45 260 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 BIVMQ86UB2 503 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 TPRA1Q86W33 373 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 OSR2Q8N2R0 312 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 RBM38Q9H0Z9 239 aaKnown RBP14.88□□□□□ -0.03
CLK2-202ENST00000361168 IL36GQ9NZH8 169 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 ST3GAL6Q9Y274 331 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 WNK2Q9Y3S1 2297 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.88□□□□□ -0.031e-31■■■□□ 19
CLK2-202ENST00000361168 MXRA5Q9NR99 2828 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 MEX3AA1L020 520 aaKnown RBP14.88□□□□□ -0.03
CLK2-202ENST00000361168 NOTOA8MTQ0 251 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 AIPO00170 330 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 DVL1O14640 695 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 PSPNO60542 156 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 HAND1O96004 215 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 CSTBP04080 98 aaKnown RBP14.88□□□□□ -0.03
CLK2-202ENST00000361168 ARSBP15848 533 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 MGMTP16455 207 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 EFNB2P52799 333 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 COL10A1Q03692 680 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 TAF9Q16594 264 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 TMEM249Q2WGJ8 235 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 Q8IYB0 196 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 FAM3DQ96BQ1 224 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 ISOC1Q96CN7 298 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 COX4I2Q96KJ9 171 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 NICN1Q9BSH3 213 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 SELENOIQ9C0D9 397 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 CHST6Q9GZX3 395 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 STEAP1Q9UHE8 339 aa14.88□□□□□ -0.03
CLK2-202ENST00000361168 ANK3Q12955 4377 aaKnown RBP14.87□□□□□ -0.03
CLK2-202ENST00000361168 F5H0A9 414 aaPredicted RBP14.87□□□□□ -0.03
CLK2-202ENST00000361168 SIRPB1O00241 398 aa14.87□□□□□ -0.03
CLK2-202ENST00000361168 HSPB6O14558 160 aa14.87□□□□□ -0.03
CLK2-202ENST00000361168 OR2H2O95918 312 aa14.87□□□□□ -0.03
CLK2-202ENST00000361168 SNRPBP14678 240 aaKnown RBP14.87□□□□□ -0.03
CLK2-202ENST00000361168 LCN2P80188 198 aa14.87□□□□□ -0.03
CLK2-202ENST00000361168 ATPAF1Q5TC12 328 aaPredicted RBP14.87□□□□□ -0.03
CLK2-202ENST00000361168 Q6P435 159 aa14.87□□□□□ -0.03
CLK2-202ENST00000361168 OR51T1Q8NGJ9 327 aa14.87□□□□□ -0.03
CLK2-202ENST00000361168 TMEM82A0PJX8 343 aa14.86□□□□□ -0.03
CLK2-202ENST00000361168 DPPA5A6NC42 116 aa14.86□□□□□ -0.03
CLK2-202ENST00000361168 H3BMQ9 156 aa14.86□□□□□ -0.03
CLK2-202ENST00000361168 MPIG6BO95866 241 aa14.86□□□□□ -0.03
CLK2-202ENST00000361168 GTF2F2P13984 249 aa14.86□□□□□ -0.03
CLK2-202ENST00000361168 RBM11P57052 281 aaKnown RBP14.86□□□□□ -0.03
CLK2-202ENST00000361168 IDNKQ5T6J7 187 aa14.86□□□□□ -0.03
CLK2-202ENST00000361168 C17orf107Q6ZR85 190 aa14.86□□□□□ -0.03
CLK2-202ENST00000361168 MSI2Q96DH6 328 aaKnown RBP14.86□□□□□ -0.03
CLK2-202ENST00000361168 SHARPINQ9H0F6 387 aa14.86□□□□□ -0.03
CLK2-202ENST00000361168 DCSTAMPQ9H295 470 aa14.86□□□□□ -0.03
CLK2-202ENST00000361168 A0A0A6YYD4 124 aa14.86□□□□□ -0.03
CLK2-202ENST00000361168 TMEM272A0A1B0GTI8 110 aa14.86□□□□□ -0.03
CLK2-202ENST00000361168 TMEM14DPA8MWL7 114 aa14.86□□□□□ -0.03
CLK2-202ENST00000361168 SIGLEC5O15389 551 aa14.86□□□□□ -0.03
CLK2-202ENST00000361168 ZNF737O75373 536 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms