RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 GEMIN2O14893 280 aaKnown RBP21.21■□□□□ 0.99
SSBP3-202ENST00000357475 GPR176Q14439 515 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 TAF9Q16594 264 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 CNPY1Q3B7I2 92 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 ZNF404Q494X3 552 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 OR2W3Q7Z3T1 314 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 PEG10Q86TG7 708 aaKnown RBP21.21■□□□□ 0.99
SSBP3-202ENST00000357475 LRRC28Q86X40 367 aaPredicted RBP21.21■□□□□ 0.99
SSBP3-202ENST00000357475 ANGPTL6Q8NI99 470 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 KCNG3Q8TAE7 436 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 RAB1CQ92928 201 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 SLC25A38Q96DW6 304 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 Q96M66 194 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 TMEM59Q9BXS4 323 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 LPAR5Q9H1C0 372 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 COMMD3Q9UBI1 195 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 FBLN5Q9UBX5 448 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 ZNF222Q9UK12 451 aa21.21■□□□□ 0.99
SSBP3-202ENST00000357475 VWC2LB2RUY7 222 aa21.2■□□□□ 0.98
SSBP3-202ENST00000357475 TNFRSF13BO14836 293 aaPredicted RBP21.2■□□□□ 0.98
SSBP3-202ENST00000357475 KNG1P01042 644 aa21.2■□□□□ 0.98
SSBP3-202ENST00000357475 MUC1P15941 1255 aaPredicted RBP21.2■□□□□ 0.98
SSBP3-202ENST00000357475 SOX6P35712 828 aa21.2■□□□□ 0.98
SSBP3-202ENST00000357475 RPS27AP62979 156 aaKnown RBP21.2■□□□□ 0.98
SSBP3-202ENST00000357475 TIMD4Q96H15 378 aa21.2■□□□□ 0.98
SSBP3-202ENST00000357475 RHOFQ9HBH0 211 aa21.2■□□□□ 0.98
SSBP3-202ENST00000357475 ABRACLQ9P1F3 81 aa21.2■□□□□ 0.98
SSBP3-202ENST00000357475 TRAV38-1A0A0B4J264 116 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 CYSRT1A8MQ03 144 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 SELLP14151 372 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 MDH2P40926 338 aaKnown RBP21.19■□□□□ 0.98
SSBP3-202ENST00000357475 ZNF146Q15072 292 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 CCL13Q99616 98 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 PIMREGQ9BSJ6 248 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 SPATA2Q9UM82 520 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 NOTCH2Q04721 2471 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 FCN3O75636 299 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 HAND1O96004 215 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 CSF3P09919 207 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 GABRR1P24046 479 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 NR4A2P43354 598 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 GABRA2P47869 451 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 CAPZA1P52907 286 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 SCN1BQ07699 218 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 NHLRC3Q5JS37 347 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 Q6P435 159 aa21.19■□□□□ 0.98
SSBP3-202ENST00000357475 KCTD12Q96CX2 325 aaKnown RBP21.19■□□□□ 0.98
SSBP3-202ENST00000357475 PRDX2P32119 198 aa21.18■□□□□ 0.98
SSBP3-202ENST00000357475 BMXP51813 675 aa21.18■□□□□ 0.98
SSBP3-202ENST00000357475 ART1P52961 327 aa21.18■□□□□ 0.98
SSBP3-202ENST00000357475 MOGAT2Q3SYC2 334 aa21.18■□□□□ 0.98
SSBP3-202ENST00000357475 SIGIRRQ6IA17 410 aa21.18■□□□□ 0.98
SSBP3-202ENST00000357475 FGFRL1Q8N441 504 aa21.18■□□□□ 0.98
SSBP3-202ENST00000357475 FAM216BQ8N7L0 139 aa21.18■□□□□ 0.98
SSBP3-202ENST00000357475 SAMD12Q8N8I0 201 aa21.18■□□□□ 0.98
SSBP3-202ENST00000357475 GAFA1Q96PS6 74 aa21.18■□□□□ 0.98
SSBP3-202ENST00000357475 NXF2Q9GZY0 626 aaKnown RBP21.18■□□□□ 0.98
SSBP3-202ENST00000357475 PCDHB16Q9NRJ7 776 aa21.18■□□□□ 0.98
SSBP3-202ENST00000357475 CTSZQ9UBR2 303 aa21.18■□□□□ 0.98
SSBP3-202ENST00000357475 RAB22AQ9UL26 194 aa21.18■□□□□ 0.98
SSBP3-202ENST00000357475 CEACAM18A8MTB9 384 aa21.17■□□□□ 0.98
SSBP3-202ENST00000357475 NDUFS8O00217 210 aa21.17■□□□□ 0.98
SSBP3-202ENST00000357475 SIRPB1O00241 398 aa21.17■□□□□ 0.98
SSBP3-202ENST00000357475 CTDSP2O14595 271 aa21.17■□□□□ 0.98
SSBP3-202ENST00000357475 HPGDSO60760 199 aa21.17■□□□□ 0.98
SSBP3-202ENST00000357475 OR2H2O95918 312 aa21.17■□□□□ 0.98
SSBP3-202ENST00000357475 IKZF1Q13422 519 aa21.17■□□□□ 0.98
SSBP3-202ENST00000357475 SPIN3Q5JUX0 258 aa21.17■□□□□ 0.98
SSBP3-202ENST00000357475 DTX3Q8N9I9 347 aa21.17■□□□□ 0.98
SSBP3-202ENST00000357475 MRPS24Q96EL2 167 aaKnown RBP21.17■□□□□ 0.98
SSBP3-202ENST00000357475 FOXC2Q99958 501 aa21.17■□□□□ 0.98
SSBP3-202ENST00000357475 TM2D1Q9BX74 207 aa21.17■□□□□ 0.98
SSBP3-202ENST00000357475 MAB21L2Q9Y586 359 aa21.17■□□□□ 0.98
SSBP3-202ENST00000357475 ETV7Q9Y603 341 aa21.17■□□□□ 0.98
SSBP3-202ENST00000357475 IGHV4-61A0A0C4DH41 118 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 SOCS1O15524 211 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 TMEM127O75204 238 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 FSTL3O95633 263 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 RAB6AP20340 208 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 DSCR9P59020 149 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 COL10A1Q03692 680 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 IL13RA2Q14627 380 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 BRICD5Q6PL45 260 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 ZNF788Q6ZQV5 615 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 MCFD2Q8NI22 146 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 ACOT12Q8WYK0 555 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 AP3S1Q92572 193 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 Q96MF0 132 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 MIXL1Q9H2W2 232 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 RHBDL2Q9NX52 303 aa21.16■□□□□ 0.98
SSBP3-202ENST00000357475 HSPB6O14558 160 aa21.15■□□□□ 0.98
SSBP3-202ENST00000357475 OR7C1O76099 320 aaPredicted RBP21.15■□□□□ 0.98
SSBP3-202ENST00000357475 EIF4EP06730 217 aaKnown RBP21.15■□□□□ 0.98
SSBP3-202ENST00000357475 VEGFCP49767 419 aa21.15■□□□□ 0.98
SSBP3-202ENST00000357475 SCAND1P57086 179 aa21.15■□□□□ 0.98
SSBP3-202ENST00000357475 TMEM155Q4W5P6 130 aa21.15■□□□□ 0.98
SSBP3-202ENST00000357475 FIP1L1Q6UN15 594 aaKnown RBP21.15■□□□□ 0.98
SSBP3-202ENST00000357475 DCDC5Q6ZRR9 648 aa21.15■□□□□ 0.98
SSBP3-202ENST00000357475 CMTM4Q8IZR5 234 aa21.15■□□□□ 0.98
SSBP3-202ENST00000357475 ZNRF1Q8ND25 227 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms