RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 DHRS11Q6UWP2 260 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 IGFL2Q6UWQ7 119 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 SGPP2Q8IWX5 399 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 Q8NFD4 153 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 PRR7Q8TB68 274 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 THAP3Q8WTV1 239 aaPredicted RBP9.36□□□□□ -0.91
RTN3-201ENST00000338850 RRNAD1Q96FB5 475 aaKnown RBP9.36□□□□□ -0.91
RTN3-201ENST00000338850 ABHD14BQ96IU4 210 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 TSNAXQ99598 290 aaKnown RBP9.36□□□□□ -0.91
RTN3-201ENST00000338850 PIGQQ9BRB3 760 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 MESP1Q9BRJ9 268 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 SUCNR1Q9BXA5 334 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 METTL9Q9H1A3 318 aa9.36□□□□□ -0.91
RTN3-201ENST00000338850 PIGBOS1A0A0B4J2F0 54 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 OR6C6A6NF89 314 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 LINC01387J3KSC0 135 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 SYNGR3O43761 229 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 RAMP1O60894 148 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 DEDDO75618 318 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 TSPAN9O75954 239 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 IFNA21P01568 189 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 GLAP06280 429 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 PTGER4P35408 488 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 NPY4RP50391 375 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 CAV2P51636 162 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 UCP2P55851 309 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 MLF1P58340 268 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 Q0VFX4 171 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 SMCO1Q147U7 214 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 ATXN7L3Q14CW9 347 aaPredicted RBP9.35□□□□□ -0.91
RTN3-201ENST00000338850 RSPO1Q2MKA7 263 aaPredicted RBP9.35□□□□□ -0.91
RTN3-201ENST00000338850 MST1LQ2TV78 715 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 ABLIM2Q6H8Q1 611 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 SKA3Q8IX90 412 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 FAM71E2Q8N5Q1 922 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.35□□□□□ -0.91
RTN3-201ENST00000338850 UBAC2Q8NBM4 344 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 SEMA6DQ8NFY4 1073 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 FNDC9Q8TBE3 224 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 SOX7Q9BT81 388 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 ULBP2Q9BZM5 246 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 MS4A7Q9GZW8 240 aaPredicted RBP9.35□□□□□ -0.91
RTN3-201ENST00000338850 BANF2Q9H503 90 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 PROK2Q9HC23 129 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 ANXA10Q9UJ72 324 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 POLEQ07864 2286 aa9.35□□□□□ -0.91
RTN3-201ENST00000338850 CENPEQ02224 2701 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 C13orf42A0A1B0GVH6 325 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 A0A1W2PP11 408 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 A1L4Q6 167 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 ATP6V1G2-DDX39BF2Z307 99 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 ZIC3O60481 467 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 ACTL6AO96019 429 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 HKR1P10072 659 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 SLC2A1P11166 492 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 CHATP28329 748 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 SFTPDP35247 375 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 RAB5CP51148 216 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 F2RL1P55085 397 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 PCBD1P61457 104 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 SRPXP78539 464 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 RAB32Q13637 225 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 RBM39Q14498 530 aaKnown RBP9.34□□□□□ -0.91
RTN3-201ENST00000338850 HFEQ30201 348 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 GPR157Q5UAW9 335 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 CARD17Q5XLA6 110 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 ZNF585AQ6P3V2 769 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 ATRAIDQ6UW56 229 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 RNF144BQ7Z419 303 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 FAM185AQ8N0U4 392 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 PUSL1Q8N0Z8 303 aaKnown RBP9.34□□□□□ -0.91
RTN3-201ENST00000338850 ZIC4Q8N9L1 334 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 OR4A4PQ8NGN8 299 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 TMEM45BQ96B21 275 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 ZNF775Q96BV0 537 aaPredicted RBP9.34□□□□□ -0.91
RTN3-201ENST00000338850 NARS2Q96I59 477 aaKnown RBP9.34□□□□□ -0.91
RTN3-201ENST00000338850 OR10C1Q96KK4 312 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 TMEM38BQ9NVV0 291 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 NECAP2Q9NVZ3 263 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 COQ3Q9NZJ6 369 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 ERRFI1Q9UJM3 462 aaPredicted RBP9.34□□□□□ -0.91
RTN3-201ENST00000338850 DKKL1Q9UK85 242 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 PIGLQ9Y2B2 252 aa9.34□□□□□ -0.91
RTN3-201ENST00000338850 CNTRLQ7Z7A1 2325 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 LOC100509620A0A075B734 347 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 DUXBA0A1W2PPF3 345 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 MSGN1A6NI15 193 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 E5RGE8 158 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 E9PLN8 166 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 H7C1Q1 480 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 XRCC2O43543 280 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 SGCEO43556 437 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 FBXO24O75426 580 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 SERPINA5P05154 406 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 CD5P06127 495 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 SEC11BP0C7V7 166 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 FCGR2AP12318 317 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 FOLR2P14207 255 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 FAHP16930 419 aa9.33□□□□□ -0.92
RTN3-201ENST00000338850 ZNF708P17019 499 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms