RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 SSBP3Q9BWW4 388 aaPredicted RBP12.81□□□□□ -0.36
SEC13-201ENST00000337354 PLGRKTQ9HBL7 147 aa12.81□□□□□ -0.36
SEC13-201ENST00000337354 POLR3KQ9Y2Y1 108 aaPredicted RBP12.81□□□□□ -0.36
SEC13-201ENST00000337354 DYSFO75923 2080 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 PPIAL4CA0A0B4J2A2 164 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 A8MXK9 166 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 FAM157AC9JC47 383 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 TMEM127O75204 238 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 HTR3BO95264 441 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 SLC22A6Q4U2R8 563 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 LRRC10Q5BKY1 277 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 CD276Q5ZPR3 534 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 WDR25Q64LD2 544 aaPredicted RBP12.8□□□□□ -0.36
SEC13-201ENST00000337354 OSR2Q8N2R0 312 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 CD177Q8N6Q3 437 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 MSI2Q96DH6 328 aaKnown RBP12.8□□□□□ -0.36
SEC13-201ENST00000337354 GAFA1Q96PS6 74 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 GFI1Q99684 422 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 NKX3-1Q99801 234 aaPredicted RBP12.8□□□□□ -0.36
SEC13-201ENST00000337354 FAM234AQ9H0X4 552 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 CST11Q9H112 138 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 CTSZQ9UBR2 303 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 OR14J1Q9UGF5 321 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 MAB21L2Q9Y586 359 aa12.8□□□□□ -0.36
SEC13-201ENST00000337354 VPS13CQ709C8 3753 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 IFITM5A6NNB3 132 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 NOTOA8MTQ0 251 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 H3BUI4 141 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 DVL1O14640 695 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 BPNT1O95861 308 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 ECDO95905 644 aaPredicted RBP12.79□□□□□ -0.36
SEC13-201ENST00000337354 HAND1O96004 215 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 MSMBP08118 114 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 ARSBP15848 533 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 SERPINA2P20848 420 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 LMO1P25800 156 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 SDC2P34741 201 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 IL13RA2Q14627 380 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 RAB11BQ15907 218 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 Q71RC1 249 aaPredicted RBP12.79□□□□□ -0.36
SEC13-201ENST00000337354 LINC00596Q86U02 117 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 CHST4Q8NCG5 386 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 OR5D13Q8NGL4 314 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 OR10K1Q8NGX5 313 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 KCNG3Q8TAE7 436 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 PPP1R35Q8TAP8 253 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 SLC25A28Q96A46 364 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 DMRTB1Q96MA1 342 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 C1orf147Q96MC9 270 aaPredicted RBP12.79□□□□□ -0.36
SEC13-201ENST00000337354 STEAP1Q9UHE8 339 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 ST3GAL6Q9Y274 331 aa12.79□□□□□ -0.36
SEC13-201ENST00000337354 ZNF469Q96JG9 3925 aaPredicted RBP12.79□□□□□ -0.36
SEC13-201ENST00000337354 TRAV20A0A0B4J274 112 aa12.78□□□□□ -0.36
SEC13-201ENST00000337354 AIPO00170 330 aa12.78□□□□□ -0.36
SEC13-201ENST00000337354 DEGS1O15121 323 aa12.78□□□□□ -0.36
SEC13-201ENST00000337354 CD5LO43866 347 aa12.78□□□□□ -0.36
SEC13-201ENST00000337354 GABARAPO95166 117 aa12.78□□□□□ -0.36
SEC13-201ENST00000337354 TGFAP01135 160 aa12.78□□□□□ -0.36
SEC13-201ENST00000337354 CALCBP10092 127 aa12.78□□□□□ -0.36
SEC13-201ENST00000337354 GATA3P23771 443 aa12.78□□□□□ -0.36
SEC13-201ENST00000337354 DVL1P1P54792 670 aaPredicted RBP12.78□□□□□ -0.36
SEC13-201ENST00000337354 CAV3P56539 151 aa12.78□□□□□ -0.36
SEC13-201ENST00000337354 SEC61A1P61619 476 aaKnown RBP12.78□□□□□ -0.36
SEC13-201ENST00000337354 COL10A1Q03692 680 aa12.78□□□□□ -0.36
SEC13-201ENST00000337354 CROCCP3Q8IVE0 287 aa12.78□□□□□ -0.36
SEC13-201ENST00000337354 FAM216BQ8N7L0 139 aa12.78□□□□□ -0.36
SEC13-201ENST00000337354 ZNRF1Q8ND25 227 aa12.78□□□□□ -0.36
SEC13-201ENST00000337354 SNX22Q96L94 193 aa12.78□□□□□ -0.36
SEC13-201ENST00000337354 SLC25A10Q9UBX3 287 aaPredicted RBP12.78□□□□□ -0.36
SEC13-201ENST00000337354 TANC2Q9HCD6 1990 aa12.77□□□□□ -0.36
SEC13-201ENST00000337354 K7N7A8 449 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 CRTAPO75718 401 aaPredicted RBP12.77□□□□□ -0.37
SEC13-201ENST00000337354 IL1AP01583 271 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 TK1P04183 234 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 LIPFP07098 398 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 ZFP36P26651 326 aaKnown RBP12.77□□□□□ -0.37
SEC13-201ENST00000337354 DUSP1P28562 367 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 OR10A3P58181 314 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 IKZF1Q13422 519 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 MPV17LQ2QL34 196 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 GPR107Q5VW38 600 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 OR2W3Q7Z3T1 314 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 TMEM186Q96B77 213 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 RNF167Q9H6Y7 350 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 IFT22Q9H7X7 185 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 IL36RNQ9UBH0 155 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 FBLN5Q9UBX5 448 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 OR5V1Q9UGF6 321 aa12.77□□□□□ -0.37
SEC13-201ENST00000337354 LOC105371242A0A075B767 164 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM90A10PA6NDY2 464 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM90A18PA6NE21 464 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM90A16PA6NEW6 464 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM90A20PA6NIJ5 464 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM90A8PA6NJQ4 464 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM90A7PA6NKC0 464 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM90A22PA8MWA6 464 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 KIAA1324LA8MWY0 1029 aaPredicted RBP12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM90A12PA8MX19 464 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM90A5PA8MXJ8 464 aa12.76□□□□□ -0.37
SEC13-201ENST00000337354 FAM90A23PA8MXZ1 464 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms