RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 SRMP19623 302 aa17.35■□□□□ 0.37
YBX1-202ENST00000332220 LRRC10Q5BKY1 277 aa17.35■□□□□ 0.37
YBX1-202ENST00000332220 SYT6Q5T7P8 510 aaPredicted RBP17.35■□□□□ 0.37
YBX1-202ENST00000332220 CD200R1LQ6Q8B3 271 aa17.35■□□□□ 0.37
YBX1-202ENST00000332220 BTN2A1Q7KYR7 527 aa17.35■□□□□ 0.37
YBX1-202ENST00000332220 JAGN1Q8N5M9 183 aa17.35■□□□□ 0.37
YBX1-202ENST00000332220 TMEM185AQ8NFB2 350 aa17.35■□□□□ 0.37
YBX1-202ENST00000332220 OR4M2Q8NGB6 313 aa17.35■□□□□ 0.37
YBX1-202ENST00000332220 OR10K1Q8NGX5 313 aa17.35■□□□□ 0.37
YBX1-202ENST00000332220 RAB40AQ8WXH6 277 aa17.35■□□□□ 0.37
YBX1-202ENST00000332220 PHYHIPQ92561 330 aa17.35■□□□□ 0.37
YBX1-202ENST00000332220 MUL1Q969V5 352 aa17.35■□□□□ 0.37
YBX1-202ENST00000332220 ELL3Q9HB65 397 aaPredicted RBP17.35■□□□□ 0.37
YBX1-202ENST00000332220 SLC25A10Q9UBX3 287 aaPredicted RBP17.35■□□□□ 0.37
YBX1-202ENST00000332220 COL10A1Q03692 680 aa17.34■□□□□ 0.37
YBX1-202ENST00000332220 C1orf229Q6ZS94 237 aaPredicted RBP17.34■□□□□ 0.37
YBX1-202ENST00000332220 NKAIN3Q8N8D7 197 aa17.34■□□□□ 0.37
YBX1-202ENST00000332220 PNLDC1Q8NA58 520 aaKnown RBP17.34■□□□□ 0.37
YBX1-202ENST00000332220 NUDT16L1Q9BRJ7 211 aaKnown RBP17.34■□□□□ 0.37
YBX1-202ENST00000332220 CNTD2Q9H8S5 307 aa17.34■□□□□ 0.37
YBX1-202ENST00000332220 RHOFQ9HBH0 211 aa17.34■□□□□ 0.37
YBX1-202ENST00000332220 MXRA5Q9NR99 2828 aa17.34■□□□□ 0.37
YBX1-202ENST00000332220 ING4Q9UNL4 249 aa17.34■□□□□ 0.37
YBX1-202ENST00000332220 GSTK1Q9Y2Q3 226 aa17.34■□□□□ 0.37
YBX1-202ENST00000332220 ZFHX3Q15911 3703 aa17.34■□□□□ 0.37
YBX1-202ENST00000332220 HAND1O96004 215 aa17.33■□□□□ 0.36
YBX1-202ENST00000332220 GATA3P23771 443 aa17.33■□□□□ 0.36
YBX1-202ENST00000332220 CAV3P56539 151 aa17.33■□□□□ 0.36
YBX1-202ENST00000332220 ZNF146Q15072 292 aa17.33■□□□□ 0.36
YBX1-202ENST00000332220 CD276Q5ZPR3 534 aa17.33■□□□□ 0.36
YBX1-202ENST00000332220 ELP2Q6IA86 826 aa17.33■□□□□ 0.36
YBX1-202ENST00000332220 FIP1L1Q6UN15 594 aaKnown RBP17.33■□□□□ 0.36
YBX1-202ENST00000332220 CDH26Q8IXH8 852 aa17.33■□□□□ 0.36
YBX1-202ENST00000332220 ZNF561Q8N587 486 aa17.33■□□□□ 0.36
YBX1-202ENST00000332220 OR4D6Q8NGJ1 314 aa17.33■□□□□ 0.36
YBX1-202ENST00000332220 GFI1Q99684 422 aa17.33■□□□□ 0.36
YBX1-202ENST00000332220 OPN4Q9UHM6 478 aa17.33■□□□□ 0.36
YBX1-202ENST00000332220 KIR2DS1A0A191URI9 304 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 TRDV1A0A1B0GX56 115 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 MEGF11A6BM72 1044 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 TRIM64CA6NLI5 447 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 ZNF737O75373 536 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 ARL6IP5O75915 188 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 NDUFB7P17568 137 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 CALRP27797 417 aaKnown RBP17.32■□□□□ 0.36
YBX1-202ENST00000332220 MTNR1BP49286 362 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 CAPZA1P52907 286 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 FGF12P61328 243 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 RSU1Q15404 277 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 SPIN3Q5JUX0 258 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 Q8NFD4 153 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 H1FXQ92522 213 aaKnown RBP17.32■□□□□ 0.36
YBX1-202ENST00000332220 SHARPINQ9H0F6 387 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 C7orf69Q9H7B7 122 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 SEBOXQ9HB31 216 aaPredicted RBP17.32■□□□□ 0.36
YBX1-202ENST00000332220 IL36GQ9NZH8 169 aa17.32■□□□□ 0.36
YBX1-202ENST00000332220 RPUSD1Q9UJJ7 312 aaKnown RBP17.32■□□□□ 0.36
YBX1-202ENST00000332220 MRPS28Q9Y2Q9 187 aaKnown RBP17.32■□□□□ 0.36
YBX1-202ENST00000332220 NF1P21359 2839 aa17.31■□□□□ 0.36
YBX1-202ENST00000332220 A0A1W2PP11 408 aa17.31■□□□□ 0.36
YBX1-202ENST00000332220 TMEM82A0PJX8 343 aa17.31■□□□□ 0.36
YBX1-202ENST00000332220 J3QLI3 93 aa17.31■□□□□ 0.36
YBX1-202ENST00000332220 ENSAO43768 121 aaKnown RBP17.31■□□□□ 0.36
YBX1-202ENST00000332220 CRLF1O75462 422 aa17.31■□□□□ 0.36
YBX1-202ENST00000332220 HTR3BO95264 441 aa17.31■□□□□ 0.36
YBX1-202ENST00000332220 CHRM2P08172 466 aa17.31■□□□□ 0.36
YBX1-202ENST00000332220 PAX8Q06710 450 aa17.31■□□□□ 0.36
YBX1-202ENST00000332220 ASCC1Q8N9N2 400 aaKnown RBP17.31■□□□□ 0.36
YBX1-202ENST00000332220 LY6G5BQ8NDX9 201 aa17.31■□□□□ 0.36
YBX1-202ENST00000332220 C1orf147Q96MC9 270 aaPredicted RBP17.31■□□□□ 0.36
YBX1-202ENST00000332220 NR1H4Q96RI1 486 aaPredicted RBP17.31■□□□□ 0.36
YBX1-202ENST00000332220 DCTN5Q9BTE1 182 aa17.31■□□□□ 0.36
YBX1-202ENST00000332220 SLITRK2Q9H156 845 aa17.31■□□□□ 0.36
YBX1-202ENST00000332220 METTL9Q9H1A3 318 aa17.31■□□□□ 0.36
YBX1-202ENST00000332220 SHISA3A0PJX4 238 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 K7N7A8 449 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 GPR37O15354 613 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 ECDO95905 644 aaPredicted RBP17.3■□□□□ 0.36
YBX1-202ENST00000332220 TK1P04183 234 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 SMIM18P0DKX4 95 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 CD37P11049 281 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 SERPINA2P20848 420 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 PDCD1Q15116 288 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 C11orf91Q3C1V1 193 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 PIGYQ3MUY2 71 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 SLC22A6Q4U2R8 563 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 AWAT2Q6E213 333 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 Q6P435 159 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 GLIPR1L1Q6UWM5 242 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 BTNL3Q6UXE8 466 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 C17orf107Q6ZR85 190 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 OR51T1Q8NGJ9 327 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 S100A13Q99584 98 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 UQCC2Q9BRT2 126 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 EXOSC4Q9NPD3 245 aaKnown RBP17.3■□□□□ 0.36
YBX1-202ENST00000332220 CDC42EP3Q9UKI2 254 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 AK6Q9Y3D8 172 aaKnown RBP17.3■□□□□ 0.36
YBX1-202ENST00000332220 JMJD1CQ15652 2540 aa17.3■□□□□ 0.36
YBX1-202ENST00000332220 SIRPB1O00241 398 aa17.29■□□□□ 0.36
YBX1-202ENST00000332220 SH2D1BO14796 132 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms