RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 MPIG6BO95866 241 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 ZNF44P15621 663 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 MAGEB1P43366 347 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 TAS2R46P59540 309 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 GNG2P59768 71 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 SEC61A1P61619 476 aaKnown RBP4.34□□□□□ -1.71
LRIT3-201ENST00000327908 TAGLNQ01995 201 aaKnown RBP4.34□□□□□ -1.71
LRIT3-201ENST00000327908 HNRNPA0Q13151 305 aaKnown RBP4.34□□□□□ -1.71
LRIT3-201ENST00000327908 MAB21L1Q13394 359 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 CARTPTQ16568 116 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 SPANXN2Q5MJ10 180 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 IDNKQ5T6J7 187 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 C22orf34Q6ZV56 151 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 TMEM17Q86X19 198 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 TGIF2LYQ8IUE0 185 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 C8orf31Q8N9H6 132 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 MCFD2Q8NI22 146 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 NEK7Q8TDX7 302 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 RPL3LQ92901 407 aaKnown RBP4.34□□□□□ -1.71
LRIT3-201ENST00000327908 SSBP3Q9BWW4 388 aaPredicted RBP4.34□□□□□ -1.71
LRIT3-201ENST00000327908 CNTD2Q9H8S5 307 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 MYEF2Q9P2K5 600 aaKnown RBP4.34□□□□□ -1.71
LRIT3-201ENST00000327908 KCNS2Q9ULS6 477 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 CEPT1Q9Y6K0 416 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 FAM25AB3EWG3 89 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 FAM25CB3EWG5 89 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 FAM25GB3EWG6 89 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 LDLRAD4O15165 306 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 TXNL1O43396 289 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 IGHV2-5P01817 119 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 RCVRNP35243 200 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 ZNF45Q02386 682 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 PRAMEF6Q5VXH4 476 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 BIVMQ86UB2 503 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 LYPD6Q86Y78 171 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 OR10R2Q8NGX6 335 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 OR10AC1Q8NH08 325 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 ANGPTL6Q8NI99 470 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 RAB3CQ96E17 227 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 NXF2Q9GZY0 626 aaKnown RBP4.34□□□□□ -1.71
LRIT3-201ENST00000327908 ZNF286AQ9HBT8 521 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 LPAR2Q9HBW0 351 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 ST3GAL6Q9Y274 331 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 AK6Q9Y3D8 172 aaKnown RBP4.34□□□□□ -1.71
LRIT3-201ENST00000327908 MED12Q93074 2177 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 CHD8Q9HCK8 2581 aa4.34□□□□□ -1.71
LRIT3-201ENST00000327908 TRAV8-7A0A075B6U6 113 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 A0A0G2JMP0 313 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 A0A0X1KG70 313 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 K7N7A8 449 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 XRCC3O43542 346 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 HPXP02790 462 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 RAB7AP51149 207 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 CTF1Q16619 201 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 SLC22A6Q4U2R8 563 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 OTPQ5XKR4 325 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 FAM71F2Q6NXP2 309 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF565Q8N9K5 539 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 OR4M2Q8NGB6 313 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 OR4D6Q8NGJ1 314 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 EDARADDQ8WWZ3 215 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 PERPQ96FX8 193 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 JMJD8Q96S16 334 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 REG4Q9BYZ8 158 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 SELENOIQ9C0D9 397 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 C12orf4Q9NQ89 552 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 UFSP2Q9NUQ7 469 aa4.34□□□□□ -1.72
LRIT3-201ENST00000327908 SLC25A10Q9UBX3 287 aaPredicted RBP4.34□□□□□ -1.72
LRIT3-201ENST00000327908 LOC105371242A0A075B767 164 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 H3BMQ9 156 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 BCL3P20749 454 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 SERPINA2P20848 420 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 CDKN1AP38936 164 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 CEACAM3P40198 252 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 GABRA2P47869 451 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 P2RX3P56373 397 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 MSMPQ1L6U9 139 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 C2orf76Q3KRA6 126 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 OR51A4Q8NGJ6 313 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 OR13D1Q8NGV5 346 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 DYNC2LI1Q8TCX1 351 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 SGCDQ92629 289 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 YIPF5Q969M3 257 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 LIN7BQ9HAP6 207 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 CHMP1AQ9HD42 196 aaPredicted RBP4.33□□□□□ -1.72
LRIT3-201ENST00000327908 PLEKHJ1Q9NW61 149 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 ETAA1Q9NY74 926 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 DAPK2Q9UIK4 370 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF222Q9UK12 451 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 FREM1Q5H8C1 2179 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 NAP1L6A6NFF2 107 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 CEACAM18A8MTB9 384 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 PYCARD-AS1I3L0S3 204 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 B3GALNT1O75752 331 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 TSPAN9O75954 239 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 MELTFP08582 738 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 PSG2P11465 335 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 CD80P33681 288 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 MEF2DQ14814 521 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 ALKBH6Q3KRA9 238 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms