RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 CFHR4Q92496 578 aa6.6□□□□□ -1.35
TPM3-203ENST00000312970 MALSU1Q96EH3 234 aa6.6□□□□□ -1.35
TPM3-203ENST00000312970 IL4I1Q96RQ9 567 aa6.6□□□□□ -1.35
TPM3-203ENST00000312970 CDCA4Q9BXL8 241 aa6.6□□□□□ -1.35
TPM3-203ENST00000312970 PKIBQ9C010 78 aa6.6□□□□□ -1.35
TPM3-203ENST00000312970 NPFFR1Q9GZQ6 430 aa6.6□□□□□ -1.35
TPM3-203ENST00000312970 SEPSECSQ9HD40 501 aaKnown RBP6.6□□□□□ -1.35
TPM3-203ENST00000312970 WARS2Q9UGM6 360 aaKnown RBP6.6□□□□□ -1.35
TPM3-203ENST00000312970 SLC22A13Q9Y226 551 aa6.6□□□□□ -1.35
TPM3-203ENST00000312970 TET2Q6N021 2002 aaPredicted RBP6.6□□□□□ -1.35
TPM3-203ENST00000312970 METTL15A6NJ78 407 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 VGLL3A8MV65 326 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 M0R129 80 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 SYT7O43581 403 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 RPP14O95059 124 aaKnown RBP6.59□□□□□ -1.35
TPM3-203ENST00000312970 SERPINA3P01011 423 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 OPN1MWP04001 364 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 ARG1P05089 322 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 OR2T7P0C7T2 308 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 ZNF728P0DKX0 622 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 OPN1MW2P0DN77 364 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 OPN1MW3P0DN78 364 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 PIPP12273 146 aaPredicted RBP6.59□□□□□ -1.35
TPM3-203ENST00000312970 CCL1P22362 96 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 FASP25445 335 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 EPHA2P29317 976 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 RAB13P51153 203 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 FUT6P51993 359 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 DLX6P56179 175 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 VAMP2P63027 116 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 COL10A1Q03692 680 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 EMX1Q04741 257 aaPredicted RBP6.59□□□□□ -1.35
TPM3-203ENST00000312970 ZNF273Q14593 569 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 UBE2V2Q15819 145 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 ATP6AP1Q15904 470 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 ODF4Q2M2E3 257 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 C12orf73Q69YU5 71 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 KDM4DQ6B0I6 523 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 ZNF782Q6ZMW2 699 aaPredicted RBP6.59□□□□□ -1.35
TPM3-203ENST00000312970 PLEKHG7Q6ZR37 379 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 GDPD3Q7L5L3 318 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 LHFPL4Q7Z7J7 247 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 CATSPERDQ86XM0 798 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 ZDHHC13Q8IUH4 622 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 EGFL6Q8IUX8 553 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 BATF2Q8N1L9 274 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 KLHDC1Q8N7A1 406 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 ASCC1Q8N9N2 400 aaKnown RBP6.59□□□□□ -1.35
TPM3-203ENST00000312970 CCDC54Q8NEL0 328 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 OR11H6Q8NGC7 330 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 OR13D1Q8NGV5 346 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 TRMT10AQ8TBZ6 339 aaKnown RBP6.59□□□□□ -1.35
TPM3-203ENST00000312970 BCAS4Q8TDM0 211 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 CEP19Q96LK0 163 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 TBX5Q99593 518 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 NKX3-1Q99801 234 aaPredicted RBP6.59□□□□□ -1.35
TPM3-203ENST00000312970 CADM1Q9BY67 442 aaKnown RBP6.59□□□□□ -1.35
TPM3-203ENST00000312970 GHITMQ9H3K2 345 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 PLEKHA1Q9HB21 404 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 MTCH1Q9NZJ7 389 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 ENOPH1Q9UHY7 261 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 FOXJ3Q9UPW0 622 aa6.59□□□□□ -1.35
TPM3-203ENST00000312970 TBL2Q9Y4P3 447 aaKnown RBP6.59□□□□□ -1.35
TPM3-203ENST00000312970 A0A1W2PQL4 384 aaPredicted RBP6.58□□□□□ -1.36
TPM3-203ENST00000312970 F8VVB4 439 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 F8VWA3 439 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 CHST1O43916 411 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 ZNF737O75373 536 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 GATBO75879 557 aaKnown RBP6.58□□□□□ -1.36
TPM3-203ENST00000312970 SULT1C4O75897 302 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 ALX3O95076 343 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 RBP4P02753 201 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 VSIG10L2P0DP72 767 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 HTR1FP30939 366 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 ATP6V1E1P36543 226 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 EDDM3BP56851 147 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 OR12D2P58182 307 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 RPS16P62249 146 aaKnown RBP6.58□□□□□ -1.36
TPM3-203ENST00000312970 MEF2CQ06413 473 aaPredicted RBP6.58□□□□□ -1.36
TPM3-203ENST00000312970 TMED1Q13445 227 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 FAM189A2Q15884 450 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 SSX2Q16385 188 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 FBLN7Q53RD9 439 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 KHDC1LQ5JSQ8 128 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 LIN54Q6MZP7 749 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 SSX6Q7RTT6 188 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 ENTHD1Q8IYW4 607 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 DYNAPQ8N1N2 210 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 C11orf44Q8N8P7 122 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 RPS4Y2Q8TD47 263 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 FOXRED1Q96CU9 486 aaPredicted RBP6.58□□□□□ -1.36
TPM3-203ENST00000312970 C10orf35Q96D05 121 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 SNX22Q96L94 193 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 MYCBPQ99417 103 aaPredicted RBP6.58□□□□□ -1.36
TPM3-203ENST00000312970 SEBOXQ9HB31 216 aaPredicted RBP6.58□□□□□ -1.36
TPM3-203ENST00000312970 ABCB10Q9NRK6 738 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 PITPNC1Q9UKF7 332 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 AP4S1Q9Y587 144 aa6.58□□□□□ -1.36
TPM3-203ENST00000312970 DNAH3Q8TD57 4116 aa6.57□□□□□ -1.36
TPM3-203ENST00000312970 IGKV1-27A0A075B6S5 117 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms