RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 ATMQ13315 3056 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 CST7O76096 145 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 CCL20P78556 96 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 GNMTQ14749 295 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 SLC22A25Q6T423 547 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 SHDQ96IW2 340 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 PRO1933Q9H354 126 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 TMPRSS5Q9H3S3 457 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 DKKL1Q9UK85 242 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 SLC7A11Q9UPY5 501 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 ABCA4P78363 2273 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 FAM157AC9JC47 383 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 H0YL77 283 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 WRBO00258 174 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 HMGB3O15347 200 aaKnown RBP11.85□□□□□ -0.51
NPAS4-201ENST00000311034 TLX3O43711 291 aaPredicted RBP11.85□□□□□ -0.51
NPAS4-201ENST00000311034 ZNF17P17021 662 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 APOBEC1P41238 236 aaKnown RBP11.85□□□□□ -0.51
NPAS4-201ENST00000311034 FAM3AP98173 230 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 PRRG4Q9BZD6 226 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 TGIF2Q9GZN2 237 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 ZNF576Q9H609 170 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 A0A1B0GX78 115 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 ANKUB1A6NFN9 424 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 LYL1P12980 280 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 TUBG1P23258 451 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 CSNK1A1P48729 337 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 SMAD4Q13485 552 aaKnown RBP11.85□□□□□ -0.51
NPAS4-201ENST00000311034 OR14L1PQ8NHC6 308 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 ZNF385AQ96PM9 386 aaKnown RBP11.85□□□□□ -0.51
NPAS4-201ENST00000311034 ULBP2Q9BZM5 246 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 TWSG1Q9GZX9 223 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 PLEKHA2Q9HB19 425 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 LIPGQ9Y5X9 500 aa11.85□□□□□ -0.51
NPAS4-201ENST00000311034 IGKV3D-11A0A0A0MRZ8 115 aa11.84□□□□□ -0.51
NPAS4-201ENST00000311034 NSG1A0A0A6YYJ2 146 aa11.84□□□□□ -0.51
NPAS4-201ENST00000311034 EFNA2O43921 213 aa11.84□□□□□ -0.51
NPAS4-201ENST00000311034 DANCRP0C864 163 aa11.84□□□□□ -0.51
NPAS4-201ENST00000311034 MDKP21741 143 aaPredicted RBP11.84□□□□□ -0.51
NPAS4-201ENST00000311034 HAAOP46952 286 aa11.84□□□□□ -0.51
NPAS4-201ENST00000311034 ZNF84P51523 738 aa11.84□□□□□ -0.51
NPAS4-201ENST00000311034 AFF3P51826 1226 aaKnown RBP11.84□□□□□ -0.51
NPAS4-201ENST00000311034 RPS23P62266 143 aaKnown RBP11.84□□□□□ -0.51
NPAS4-201ENST00000311034 IGHV1OR21-1A0A087WYE8 117 aa11.84□□□□□ -0.51
NPAS4-201ENST00000311034 CYB5BO43169 146 aa11.84□□□□□ -0.51
NPAS4-201ENST00000311034 FAM189A2Q15884 450 aa11.84□□□□□ -0.51
NPAS4-201ENST00000311034 IZUMO4Q1ZYL8 232 aa11.84□□□□□ -0.51
NPAS4-201ENST00000311034 B3GAT1Q9P2W7 334 aa11.84□□□□□ -0.51
NPAS4-201ENST00000311034 ANXA10Q9UJ72 324 aa11.84□□□□□ -0.51
NPAS4-201ENST00000311034 RARRES3Q9UL19 164 aa11.84□□□□□ -0.51
NPAS4-201ENST00000311034 STARD10Q9Y365 291 aa11.84□□□□□ -0.51
NPAS4-201ENST00000311034 TNFSF11O14788 317 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 ST8SIA3O43173 380 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 SSSCA1O60232 199 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 KLK3P07288 261 aaPredicted RBP11.83□□□□□ -0.52
NPAS4-201ENST00000311034 BMP5P22003 454 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 GALNSP34059 522 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 HERV-K104P61576 105 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 ZXDAP98168 799 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 RHEBQ15382 184 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 NSUN5P2Q63ZY6 315 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 LURAP1LQ8IV03 231 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 UBAC2Q8NBM4 344 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 ST8SIA1Q92185 356 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 LIME1Q9H400 295 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 AK3Q9UIJ7 227 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 POMT1Q9Y6A1 747 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 BCAT2O15382 392 aaPredicted RBP11.83□□□□□ -0.52
NPAS4-201ENST00000311034 GAPDHP04406 335 aaKnown RBP11.83□□□□□ -0.52
NPAS4-201ENST00000311034 THBS4P35443 961 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 VAMP2P63027 116 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 GFI1BQ5VTD9 330 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 TMEM123Q8N131 208 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 GPR137CQ8N3F9 429 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 SEBOXQ9HB31 216 aaPredicted RBP11.83□□□□□ -0.52
NPAS4-201ENST00000311034 IGHV1OR15-9A0A0B4J2B8 117 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 SERPINE3A8MV23 424 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 GPR137BO60478 399 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 RUNX1Q01196 453 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 IL15RAQ13261 267 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 LYZL4Q96KX0 146 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 MOB1AQ9H8S9 216 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 P4HTMQ9NXG6 502 aa11.83□□□□□ -0.52
NPAS4-201ENST00000311034 TGIF2-C20orf24A0A0A6YYL0 155 aa11.82□□□□□ -0.52
NPAS4-201ENST00000311034 CRYM-AS1A6NIL9 109 aa11.82□□□□□ -0.52
NPAS4-201ENST00000311034 H3BQ15 152 aa11.82□□□□□ -0.52
NPAS4-201ENST00000311034 IGHV2-70P01814 119 aa11.82□□□□□ -0.52
NPAS4-201ENST00000311034 CTSDP07339 412 aaPredicted RBP11.82□□□□□ -0.52
NPAS4-201ENST00000311034 PGA4P0DJD7 388 aa11.82□□□□□ -0.52
NPAS4-201ENST00000311034 PGA3P0DJD8 388 aa11.82□□□□□ -0.52
NPAS4-201ENST00000311034 P2RY1P47900 373 aa11.82□□□□□ -0.52
NPAS4-201ENST00000311034 CFHR1Q03591 330 aa11.82□□□□□ -0.52
NPAS4-201ENST00000311034 PIGYQ3MUY2 71 aa11.82□□□□□ -0.52
NPAS4-201ENST00000311034 RAB39BQ96DA2 213 aa11.82□□□□□ -0.52
NPAS4-201ENST00000311034 NAA60Q9H7X0 242 aa11.82□□□□□ -0.52
NPAS4-201ENST00000311034 GAR1Q9NY12 217 aaKnown RBP11.82□□□□□ -0.52
NPAS4-201ENST00000311034 DOK5Q9P104 306 aa11.82□□□□□ -0.52
NPAS4-201ENST00000311034 CXorf65A6NEN9 183 aa11.82□□□□□ -0.52
NPAS4-201ENST00000311034 ZNF724A8MTY0 619 aa11.82□□□□□ -0.52
NPAS4-201ENST00000311034 NKX6-1P78426 367 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms