RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 KCTD20Q7Z5Y7 419 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 LHFPL4Q7Z7J7 247 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 EGFL6Q8IUX8 553 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 ASCC1Q8N9N2 400 aaKnown RBP7.88□□□□□ -1.15
VPS41-201ENST00000265745 DNAAF1Q8NEP3 725 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 OR2G2Q8NGZ5 317 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 SLAMF9Q96A28 289 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 HRASLS5Q96KN8 279 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 RAB18Q9NP72 206 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 GNG8Q9UK08 70 aa7.88□□□□□ -1.15
VPS41-201ENST00000265745 IGKV1-9A0A0C4DH69 117 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 LOC107986453A0A1B0GWG9 222 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 E9PQ18 207 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 ENTPD6O75354 484 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 CIB2O75838 187 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 INMTO95050 263 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 TSPAN15O95858 294 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 RBP4P02753 201 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 ALPLP05186 524 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 UBCP0CG48 685 aaKnown RBP7.87□□□□□ -1.15
VPS41-201ENST00000265745 RBP2P50120 134 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 MTCP1P56278 107 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 SNRPGP62308 76 aaKnown RBP7.87□□□□□ -1.15
VPS41-201ENST00000265745 MEF2CQ06413 473 aaPredicted RBP7.87□□□□□ -1.15
VPS41-201ENST00000265745 LDLRAD2Q5SZI1 272 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 TMEM244Q5VVB8 128 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 GDPD3Q7L5L3 318 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 OR8H2Q8N162 312 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 DYNAPQ8N1N2 210 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 OR11H6Q8NGC7 330 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 OR52N4Q8NGI2 321 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 FBLIM1Q8WUP2 373 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 PYDC1Q8WXC3 89 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 PP6455Q8WZ26 134 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 MALSU1Q96EH3 234 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 ADAT3Q96EY9 351 aaPredicted RBP7.87□□□□□ -1.15
VPS41-201ENST00000265745 BORCS8Q96FH0 119 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 SNX22Q96L94 193 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 IMPAD1Q9NX62 359 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 GFOD1Q9NXC2 390 aa7.87□□□□□ -1.15
VPS41-201ENST00000265745 DAPL1A0PJW8 107 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 MEX3AA1L020 520 aaKnown RBP7.86□□□□□ -1.15
VPS41-201ENST00000265745 ODF3BA8MYP8 253 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 H3BNX3 289 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 SLC16A6O15403 523 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 CHST1O43916 411 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 HAND1O96004 215 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 ARG1P05089 322 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 ISG15P05161 165 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 IGHV1-8P0DP01 117 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 PRKACBP22694 351 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 NPBWR2P48146 333 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 RAB13P51153 203 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 ATP1B3P54709 279 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 EDDM3BP56851 147 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 OR12D2P58182 307 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 NANOS3P60323 173 aaKnown RBP7.86□□□□□ -1.15
VPS41-201ENST00000265745 HERPUD1Q15011 391 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 ZNF146Q15072 292 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 C2orf68Q2NKX9 166 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 MEDAGQ5VYS4 303 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 ZNF626Q68DY1 528 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 C11orf88Q6PI97 169 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 CCBE1Q6UXH8 406 aaPredicted RBP7.86□□□□□ -1.15
VPS41-201ENST00000265745 Q6ZTK2 550 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 UTS2BQ765I0 119 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 TCF23Q7RTU1 214 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 FAM220AQ7Z4H9 259 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 Q8IYB0 196 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 ENTHD1Q8IYW4 607 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 FAM58AQ8N1B3 248 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 SVOPQ8N4V2 548 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 OR4C13Q8NGP0 309 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 OR13D1Q8NGV5 346 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 FAM110DQ8TAY7 271 aaPredicted RBP7.86□□□□□ -1.15
VPS41-201ENST00000265745 CFHR4Q92496 578 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 FGGYQ96C11 551 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 RNFT2Q96EX2 444 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 MBOAT4Q96T53 435 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 CDCA4Q9BXL8 241 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 NPFFR1Q9GZQ6 430 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 RANBP3Q9H6Z4 567 aaPredicted RBP7.86□□□□□ -1.15
VPS41-201ENST00000265745 RBFOX1Q9NWB1 397 aaKnown RBP7.86□□□□□ -1.15
VPS41-201ENST00000265745 IL36RNQ9UBH0 155 aa7.86□□□□□ -1.15
VPS41-201ENST00000265745 TBL2Q9Y4P3 447 aaKnown RBP7.86□□□□□ -1.15
VPS41-201ENST00000265745 TRBV2A0A0J9YWF9 115 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 hADV38S2A0JD32 116 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 EI24O14681 340 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 PSPNO60542 156 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 IGHA1P01876 353 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 CSF1P09603 554 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 CPEP16870 476 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 ATF1P18846 271 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 BCL3P20749 454 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 GABRR1P24046 479 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 PEX2P28328 305 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 DUSP1P28562 367 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 POU3F4P49335 361 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 ALDH3A2P51648 485 aa7.85□□□□□ -1.15
VPS41-201ENST00000265745 CCR9P51686 369 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms