RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 HES4Q9HCC6 221 aa13.11□□□□□ -0.31
GYPC-201ENST00000259254 NLKQ9UBE8 527 aa13.11□□□□□ -0.31
GYPC-201ENST00000259254 GLS2Q9UI32 602 aa13.11□□□□□ -0.31
GYPC-201ENST00000259254 F8P00451 2351 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 SPG11Q96JI7 2443 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 PLCE1Q9P212 2302 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 PPIAL4EA0A075B759 164 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 CLDN25C9JDP6 229 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 PPIAL4DF5H284 164 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 GEMIN2O14893 280 aaKnown RBP13.1□□□□□ -0.31
GYPC-201ENST00000259254 SCGNO76038 276 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 OR7C1O76099 320 aaPredicted RBP13.1□□□□□ -0.31
GYPC-201ENST00000259254 KNG1P01042 644 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 LHBP01229 141 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 CHRM2P08172 466 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 PPIAL4FP0DN26 164 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 ZNF44P15621 663 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 MRPS11P82912 194 aaKnown RBP13.1□□□□□ -0.31
GYPC-201ENST00000259254 IL13RA2Q14627 380 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 SPIN3Q5JUX0 258 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 SPANXN2Q5MJ10 180 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 TMEM69Q5SWH9 247 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 ATAD3CQ5T2N8 411 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 PEG10Q86TG7 708 aaKnown RBP13.1□□□□□ -0.31
GYPC-201ENST00000259254 BIVMQ86UB2 503 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 OR5T2Q8NGG2 359 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 NINJ1Q92982 152 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 WDFY2Q96P53 400 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 NEDD4LQ96PU5 975 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 TM2D1Q9BX74 207 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 MRPS7Q9Y2R9 242 aaKnown RBP13.1□□□□□ -0.31
GYPC-201ENST00000259254 WIPI2Q9Y4P8 454 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 PPIAL4AQ9Y536 164 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 ROS1P08922 2347 aa13.1□□□□□ -0.31
GYPC-201ENST00000259254 TRAV18A0A075B6X5 111 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 A0A0A6YYD4 124 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 OOEPA6NGQ2 149 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.09□□□□□ -0.31
GYPC-201ENST00000259254 LGALS8O00214 317 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 SH2D1BO14796 132 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 DEGS1O15121 323 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 SOCS1O15524 211 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 PPIHO43447 177 aaKnown RBP13.09□□□□□ -0.31
GYPC-201ENST00000259254 SSX4O60224 188 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 HAND1O96004 215 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 IGHV4-39P01824 125 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 CDK2P24941 298 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 BLVRBP30043 206 aaPredicted RBP13.09□□□□□ -0.31
GYPC-201ENST00000259254 CEBPDP49716 269 aaPredicted RBP13.09□□□□□ -0.31
GYPC-201ENST00000259254 ATP5J2P56134 94 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 MICBQ29980 383 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 NHLRC3Q5JS37 347 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 RAB12Q6IQ22 244 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 FAM131AQ6UXB0 335 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 LINC00596Q86U02 117 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 FAM90A1Q86YD7 464 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 OR10R2Q8NGX6 335 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 PERPQ96FX8 193 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 TIMD4Q96H15 378 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 TSC22D3Q99576 134 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 BARX1Q9HBU1 254 aaPredicted RBP13.09□□□□□ -0.31
GYPC-201ENST00000259254 MED13LQ71F56 2210 aa13.09□□□□□ -0.31
GYPC-201ENST00000259254 HRNRQ86YZ3 2850 aaPredicted RBP13.08□□□□□ -0.32
GYPC-201ENST00000259254 TRAV38-1A0A0B4J264 116 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 ISPDA4D126 451 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 FABP12A6NFH5 140 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 RFPL4AA6NLU0 287 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 OR2AT4A6NND4 320 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 RFPL4AL1F8VTS6 287 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 SIRPB1O00241 398 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 RP2O75695 350 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 TFF1P04155 84 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 DNASE1P24855 282 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 GABRA2P47869 451 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 PTH2RP49190 550 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 IL18Q14116 193 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 MPV17LQ2QL34 196 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 MOGAT2Q3SYC2 334 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 AVPI1Q5T686 147 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 CCDC190Q86UF4 302 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 NEK7Q8TDX7 302 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 RAB1CQ92928 201 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 RAB3CQ96E17 227 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 CHODLQ9H9P2 273 aa13.08□□□□□ -0.32
GYPC-201ENST00000259254 CELSR1Q9NYQ6 3014 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 A0A0A6YYH2 397 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 FAM90A10PA6NDY2 464 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 FAM90A18PA6NE21 464 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 FAM90A16PA6NEW6 464 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 FAM90A20PA6NIJ5 464 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 NKX6-3A6NJ46 265 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 A6NJ64 397 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 FAM90A8PA6NJQ4 464 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 FAM90A7PA6NKC0 464 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 FAM90A22PA8MWA6 464 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 FAM90A12PA8MX19 464 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 FAM90A5PA8MXJ8 464 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 FAM90A23PA8MXZ1 464 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 H3BUI4 141 aa13.07□□□□□ -0.32
GYPC-201ENST00000259254 RAB27BO00194 218 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms