RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 HEATR5AQ86XA9 2040 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 FANCMQ8IYD8 2048 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 ACKR3P25106 362 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 ANKRD55Q3KP44 614 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 PTCRAQ6ISU1 281 aaPredicted RBP12.11□□□□□ -0.47
NFKB1-201ENST00000226574 APCDD1LQ8NCL9 501 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 GNPNAT1Q96EK6 184 aaPredicted RBP12.11□□□□□ -0.47
NFKB1-201ENST00000226574 MESP1Q9BRJ9 268 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 CCDC187A0A096LP49 1063 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 THBS4P35443 961 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 ANKRD37Q7Z713 158 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 CRIPAKQ8N1N5 446 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 DEFB108BQ8NET1 73 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 NANOS1Q8WY41 292 aaKnown RBP12.1□□□□□ -0.47
NFKB1-201ENST00000226574 APH1AQ96BI3 265 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 NAA60Q9H7X0 242 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 PSENENQ9NZ42 101 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 GHRLQ9UBU3 117 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 PSME4Q14997 1843 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 CELA2AP08217 269 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 LPAR6P43657 344 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 SULT1A1P50225 295 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 SLC36A1Q7Z2H8 476 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 BAGE3Q86Y29 109 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 BAGE2Q86Y30 109 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 ZNF721Q8TF20 911 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 WNT16Q9UBV4 365 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 DOCK10Q96BY6 2186 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 IGLV1-36A0A0B4J1U3 117 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 IGKV1D-43A0A0B4J1Z2 117 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 IGHV1OR15-9A0A0B4J2B8 117 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 UBE2L5PA0A1B0GUS4 154 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 GSK3AP49840 483 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 HLA-CQ95604 372 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 RASL10BQ96S79 203 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 UTP23Q9BRU9 249 aaKnown RBP12.1□□□□□ -0.47
NFKB1-201ENST00000226574 SLC2A9Q9NRM0 540 aa12.1□□□□□ -0.47
NFKB1-201ENST00000226574 STRAPQ9Y3F4 350 aaKnown RBP12.1□□□□□ -0.47
NFKB1-201ENST00000226574 TRBV5-7A0A0A0MS05 114 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 FABP6P51161 128 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 SEC11CQ9BY50 192 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 PLA2G3Q9NZ20 509 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 SPINK4O60575 86 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 ACTL6BO94805 426 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 ACTL6AO96019 429 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 KITLGP21583 273 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 DCAF12Q5T6F0 453 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 ZNF66Q6ZN08 573 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 OR13G1Q8NGZ3 307 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 GFI1Q99684 422 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 ZNF426Q9BUY5 554 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 CLEC18AA5D8T8 446 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 NKX2-6A6NCS4 301 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 ZNF154Q13106 437 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 CATR1Q13166 79 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 PABPC1L2AQ5JQF8 200 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 LHFPL2Q6ZUX7 228 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 RABEPKQ7Z6M1 372 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 LINC00518Q8N0U6 118 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 CLEC18CQ8NCF0 446 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 IFI44Q8TCB0 444 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 SLC39A7Q92504 469 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 NMES1Q9C002 83 aa12.09□□□□□ -0.47
NFKB1-201ENST00000226574 PTPRDP23468 1912 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 PATJQ8NI35 1801 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 CHST1O43916 411 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 TIMM8AO60220 97 aaPredicted RBP12.08□□□□□ -0.48
NFKB1-201ENST00000226574 MPGP29372 298 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 RAB31Q13636 194 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 ZNF880Q6PDB4 577 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 ZNF610Q8N9Z0 462 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 RTN4RQ9BZR6 473 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 SMOC1Q9H4F8 434 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 HSF4Q9ULV5 492 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 V9GYS6 101 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 ABCA4P78363 2273 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 C3orf85A0A1B0GTC6 90 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 DXOO77932 396 aaKnown RBP12.08□□□□□ -0.48
NFKB1-201ENST00000226574 FCARP24071 287 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 G0S2P27469 103 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 P2RY4P51582 365 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 SAT2Q96F10 170 aaPredicted RBP12.08□□□□□ -0.48
NFKB1-201ENST00000226574 VWA8A3KMH1 1905 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 DEFB108AA8MXU0 73 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 RAB5AP20339 215 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 RAB1AP62820 205 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 GAB4Q2WGN9 574 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 KCNIP4Q6PIL6 250 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 IP6K3Q96PC2 410 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 C5orf66Q9H5L9 145 aa12.08□□□□□ -0.48
NFKB1-201ENST00000226574 AQP7O14520 342 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 TERTO14746 1132 aaKnown RBP12.07□□□□□ -0.48
NFKB1-201ENST00000226574 COL19A1Q14993 1142 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 CEBPEQ15744 281 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 IZUMO4Q1ZYL8 232 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 ADGRG7Q96K78 797 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 SNX22Q96L94 193 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 TMEM68Q96MH6 324 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 CACNG5Q9UF02 275 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 MTCH2Q9Y6C9 303 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms