RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 SLC6A13Q9NSD5 602 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 HLA-GP17693 338 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 NUDT8Q8WV74 236 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 VSTM2LQ96N03 204 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 KCNE3Q9Y6H6 103 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 PDE6DO43924 150 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 CTSVO60911 334 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 DEDDO75618 318 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 KRASP01116 189 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 SP1P08047 785 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 DMKNQ6E0U4 476 aaPredicted RBP11.16□□□□□ -0.62
LMCD1-201ENST00000157600 NFAM1Q8NET5 270 aaPredicted RBP11.16□□□□□ -0.62
LMCD1-201ENST00000157600 NEURL2Q9BR09 285 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 C20orf141Q9NUB4 165 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 CDS2O95674 445 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 TMEM97Q5BJF2 176 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 LINC01555Q8NAE3 123 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 OR11G2Q8NGC1 345 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 ALG14Q96F25 216 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 MAGT1Q9H0U3 335 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 CXXC4Q9H2H0 198 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 P4HTMQ9NXG6 502 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 ZNF835Q9Y2P0 537 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 SERTM2A0A1B0GWG4 89 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 PI3P19957 117 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 ST3GAL2Q16842 350 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 MPV17LQ2QL34 196 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 TCTEX1D1Q8N7M0 179 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 OR10D3Q8NH80 312 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 MYEOVQ96EZ4 313 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 PERPQ96FX8 193 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 STARD10Q9Y365 291 aa11.16□□□□□ -0.62
LMCD1-201ENST00000157600 S100A4P26447 101 aaKnown RBP11.15□□□□□ -0.62
LMCD1-201ENST00000157600 GNB2P62879 340 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 ZNF528Q3MIS6 628 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 LGALSLQ3ZCW2 172 aaPredicted RBP11.15□□□□□ -0.62
LMCD1-201ENST00000157600 OR10V1Q8NGI7 309 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 C2CD4CQ8TF44 421 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 ADAM20O43506 726 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 ASCL1P50553 236 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 ZNF816Q0VGE8 651 aaPredicted RBP11.15□□□□□ -0.62
LMCD1-201ENST00000157600 NKG7Q16617 165 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 HSD17B10Q99714 261 aaKnown RBP11.15□□□□□ -0.62
LMCD1-201ENST00000157600 PCOLCE2Q9UKZ9 415 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 SPTAN1Q13813 2472 aaKnown RBP11.15□□□□□ -0.62
LMCD1-201ENST00000157600 PRDX4Q13162 271 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 MAP1LC3B2A6NCE7 125 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 TMEM210A6NLX4 147 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 PGA4P0DJD7 388 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 PGA5P0DJD9 388 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 OPRK1P41145 380 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 SLC26A10Q8NG04 563 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 MAP1LC3BQ9GZQ8 125 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 KCNK15Q9H427 330 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 ADAM11O75078 769 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 HNRNPA3P51991 378 aaKnown RBP11.15□□□□□ -0.62
LMCD1-201ENST00000157600 PRSS36Q5K4E3 855 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 TMEM88Q6PEY1 159 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 CMBLQ96DG6 245 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 TMEM265A0A087WTH1 108 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 AKR7A2O43488 359 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 C9orf152Q5JTZ5 239 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 EIF4E3Q8N5X7 224 aaKnown RBP11.15□□□□□ -0.62
LMCD1-201ENST00000157600 OR52B4Q8NGK2 314 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 ANXA10Q9UJ72 324 aa11.15□□□□□ -0.62
LMCD1-201ENST00000157600 IGHV3-15A0A0B4J1V0 119 aa11.15□□□□□ -0.63
LMCD1-201ENST00000157600 TRAV38-1A0A0B4J264 116 aa11.15□□□□□ -0.63
LMCD1-201ENST00000157600 PTTG1IPP53801 180 aa11.15□□□□□ -0.63
LMCD1-201ENST00000157600 INPP5JQ15735 1006 aaPredicted RBP11.15□□□□□ -0.63
LMCD1-201ENST00000157600 LIAT1Q6ZQX7 453 aa11.15□□□□□ -0.63
LMCD1-201ENST00000157600 NECAP1Q8NC96 275 aa11.15□□□□□ -0.63
LMCD1-201ENST00000157600 OR2Y1Q8NGV0 311 aa11.15□□□□□ -0.63
LMCD1-201ENST00000157600 PCDHGA9Q9Y5G4 932 aaKnown RBP11.15□□□□□ -0.63
LMCD1-201ENST00000157600 RER1O15258 196 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 SEMG1P04279 462 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 UBAC2Q8NBM4 344 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 TRAF4Q9BUZ4 470 aaPredicted RBP11.14□□□□□ -0.63
LMCD1-201ENST00000157600 ZNF737O75373 536 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 CDAP32320 146 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 SLC25A42Q86VD7 318 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 ZNF547Q8IVP9 402 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 RPEQ96AT9 228 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 ARL2-SNX15V9GYD0 113 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 ZNF646O15015 1829 aaPredicted RBP11.14□□□□□ -0.63
LMCD1-201ENST00000157600 M0R1X1 148 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 CDC34P49427 236 aaPredicted RBP11.14□□□□□ -0.63
LMCD1-201ENST00000157600 DEFB109BQ30KR1 87 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 DEFB123Q8N688 67 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 LRFN3Q9BTN0 628 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 FOXQ1Q9C009 403 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 C1RLQ9NZP8 487 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 A0A1B0GU03 582 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 M0R143 59 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 SPRY1O43609 319 aaPredicted RBP11.14□□□□□ -0.63
LMCD1-201ENST00000157600 EPHA8P29322 1005 aaPredicted RBP11.14□□□□□ -0.63
LMCD1-201ENST00000157600 FAM3AP98173 230 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 FAM24AA6NFZ4 105 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 WNT1P04628 370 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 STUMQ69YW2 141 aa11.14□□□□□ -0.63
LMCD1-201ENST00000157600 MRGPREQ86SM8 312 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms