RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Rac3P60764 192 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Mob3cQ8BJG4 216 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Tctn1Q8BZ64 593 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 SowahbQ8BZW2 760 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 AmtQ8CFA2 403 aaKnown RBP10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 PurgQ8R4E6 350 aaKnown RBP10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Nxph3Q91VX5 252 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Cd209dQ91ZW8 237 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Nudcd2Q9CQ48 157 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Ppp1r27Q9D119 154 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Acp1Q9D358 158 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gm5849J3QPE5 117 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 GalP47212 124 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gm826Q3UQ74 109 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Lhfpl2Q8BGA2 222 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Henmt1Q8CAE2 395 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Agpat2Q8K3K7 278 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Mrpl3Q99N95 348 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Ift22Q9DAI2 185 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Galnt16Q9JJ61 558 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Hacd1Q9QY80 281 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Pcdh17E9PXF0 1157 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Zbtb25G3UW50 439 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 P01881 257 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 P01882 290 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 P58686 83 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Znf503Q7TMA2 652 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 SetmarQ80UJ9 309 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr99Q8VFE4 305 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Taf9Q8VI33 264 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Dda1Q9D9Z5 102 aa10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Mecp2Q9Z2D6 484 aaKnown RBP10.59□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Htra4A2RT60 483 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Lipo5F6QKH6 233 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Gm21976J3QNN2 249 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Adrb2P18762 418 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 ArntP53762 791 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 CxadrP97792 365 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Rhox4fQ2MDF8 205 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Rhox4cQ2MDG1 205 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Npepl1Q6NSR8 524 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Olfr222Q7TS30 318 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Impad1Q80V26 356 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Dnmt3lQ9CWR8 421 aaKnown RBP10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Rhox4aQ9D3I8 205 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Pmepa1Q9D7R2 260 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 PipoxQ9D826 390 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Vmn1r180B9EK86 305 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Vmn1r129E9QA94 307 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Slc38a6G3UVW3 457 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Gm8720K9J7F4 307 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Fbxw20Q5U467 468 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Olfr215Q8VF82 310 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Maf1Q9D0U6 258 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 CtsjQ9R014 334 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Ice1E9Q286 2241 aaKnown RBP10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Gm3072F6SKY8 209 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Gm17654F7AXR3 209 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 P18524 117 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Mfsd9Q8C0T7 466 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Smim4Q8C1Q6 80 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Olfr1388Q8VFA3 311 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Olfr1301Q8VGE7 312 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Rfpl4aQ8VH31 287 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Rnaseh2cQ9CQ18 166 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Magt1Q9CQY5 335 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Fzr1Q9R1K5 493 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Nup210lQ9D2F7 1881 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Gm29106A0A087WSP8 697 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Igkv6-32A0A140T8N9 115 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Gm9920D3YVZ2 140 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Olfr5Q60889 312 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 DhrsxQ8VBZ0 335 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Vmn1r41Q9EQ44 310 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 PomcP01193 235 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Fbxl2Q8BH16 423 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Sdhaf2Q8C6I2 164 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 FuomQ8R2K1 153 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Olfr633Q8VF02 312 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Q9CQ90 155 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 HpgdsQ9JHF7 199 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Tmem9bQ9JJR8 199 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Tmem37Q9JJV3 211 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Syt11Q9R0N3 430 aa10.58□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Malrd1A2AJX4 2123 aa10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 RnlsA7RDN6 342 aa10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Kcnk3O35111 409 aa10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Sp100O35892 482 aa10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 P01667 111 aa10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Alox5apP30355 161 aa10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 NodalP43021 354 aa10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Sema3bQ62177 748 aa10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Cdhr3Q8BL00 831 aa10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Ubac2Q8R1K1 345 aa10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Olfr829Q8VGX1 321 aa10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Spred1Q924S8 444 aa10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Ca15Q99N23 324 aa10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Cyb5bQ9CQX2 146 aaKnown RBP10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 Zfp53Q9Z117 652 aa10.57□□□□□ -0.72
Pcif1-201ENSMUST00000041643 PrnA0A075B668 197 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms