RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 C1saQ8CG14 688 aa14.4□□□□□ -0.1
Trim28-201ENSMUST00000005705 Wrap73Q9JM98 462 aa14.4□□□□□ -0.1
Trim28-201ENSMUST00000005705 Ncor1Q60974 2453 aa14.4□□□□□ -0.11
Trim28-201ENSMUST00000005705 2410004P03RikA0A087WQY2 205 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Vmn1r152E9Q9N3 307 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Fbxw25F7C9P2 466 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Slc17a3G3UWD9 498 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Vmn1r104L7N293 307 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Sdc1P18828 311 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Lyl1P27792 278 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 VtnP29788 478 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Gnb3Q61011 340 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Olfr1211Q7TR09 311 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Olfr222Q7TS30 318 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Slc25a44Q8BGF9 314 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 HaghQ99KB8 309 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 PsphQ99LS3 225 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 MrnipQ9D1F5 335 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Exosc8Q9D753 276 aaKnown RBP14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Marveld3Q9D956 376 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Fbxo6Q9QZN4 295 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Pfdn5Q9WU28 154 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Zfp982A2A8Q4 368 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Vmn1r174E9PYW5 313 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Vmn1r103K7N6X7 305 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Vmn1r122K7N726 305 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Vmn1r151L7N288 305 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Wsb1O54927 421 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 P01634 136 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 P01795 144 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 LtbP41155 306 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Faap20Q3UN58 186 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Olfr140Q60878 302 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Inca1Q6PKN7 231 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Txnl1Q8CDN6 289 aaKnown RBP14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Lgi3Q8K406 548 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Olfr536Q8VFE9 307 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Wdr20Q9D5R2 567 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 SelenofQ9ERR7 162 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Lrp3E9Q1T6 790 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Tcn2O88968 430 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Hsd17b8P50171 259 aaKnown RBP14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Lbx1P52955 282 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Abcd3P55096 659 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Olfr1148Q7TR35 314 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Cbr3Q8K354 277 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Acer2Q8VD53 275 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Olfr919Q8VF78 315 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Ubl7Q91W67 380 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 SdhdQ9CXV1 159 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Q9DAE7 121 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Arl6ip1Q9JKW0 203 aa14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 Prr12E9PYL2 2035 aaKnown RBP14.39□□□□□ -0.11
Trim28-201ENSMUST00000005705 HelzQ6DFV5 1964 aaKnown RBP14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Gm10358A0A1D5RLD8 333 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Vmn2r66K7N6R9 851 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 AipO08915 330 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Hist1h1cP15864 212 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 GapdhP16858 333 aaKnown RBP14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Gstm3P19639 218 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Ccl5P30882 91 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Cobll1Q3UMF0 1273 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 9130023H24RikQ8BG98 337 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Adamts4Q8BNJ2 833 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Reep4Q8K072 257 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Prelid1Q8R107 217 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Elac1Q8VEB6 362 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Steap4Q923B6 470 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 9230104L09RikQ9D264 133 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 HikeshiQ9DD02 197 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Olfr710Q9EP55 310 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 SncgQ9Z0F7 123 aaKnown RBP14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Gm3839S4R1W1 333 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Olfr1289A0A288CFY5 326 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Ntsr1O88319 424 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Pax4P32115 349 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Pcbp4P57724 403 aaKnown RBP14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Ear2P97425 156 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 OmgQ63912 440 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Dact2Q7TN08 757 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Fam57bQ7TNV1 275 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Gpatch2Q7TQC7 527 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Exosc3Q7TQK4 274 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 GgnQ80WJ1 673 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Nudt16l1Q8VHN8 211 aaKnown RBP14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Slc34a2Q9DBP0 697 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 Ap4m1Q9JKC7 449 aa14.38□□□□□ -0.11
Trim28-201ENSMUST00000005705 4933408B17RikG3X9B4 273 aa14.37□□□□□ -0.11
Trim28-201ENSMUST00000005705 Defa-rs12P50716 91 aa14.37□□□□□ -0.11
Trim28-201ENSMUST00000005705 Hmga2P52927 108 aa14.37□□□□□ -0.11
Trim28-201ENSMUST00000005705 Ascl1Q02067 231 aa14.37□□□□□ -0.11
Trim28-201ENSMUST00000005705 Tie1Q06806 1134 aa14.37□□□□□ -0.11
Trim28-201ENSMUST00000005705 Q3TEI4 1023 aa14.37□□□□□ -0.11
Trim28-201ENSMUST00000005705 Ceacam19Q3TQ88 271 aa14.37□□□□□ -0.11
Trim28-201ENSMUST00000005705 Zfp52Q8BJ45 724 aa14.37□□□□□ -0.11
Trim28-201ENSMUST00000005705 Calhm5Q8R100 309 aa14.37□□□□□ -0.11
Trim28-201ENSMUST00000005705 Tmem267Q8VDR5 215 aa14.37□□□□□ -0.11
Trim28-201ENSMUST00000005705 Olfr460Q8VF31 314 aa14.37□□□□□ -0.11
Trim28-201ENSMUST00000005705 Slc33a1Q99J27 550 aa14.37□□□□□ -0.11
Trim28-201ENSMUST00000005705 MynnQ99MD8 610 aa14.37□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms