RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	LRRC20	Q8TCA0	184 aa		5.24	□□□□□ -1.57
CASC19-238	ENST00000641523	SPRYD4	Q8WW59	207 aa	Predicted RBP	5.24	□□□□□ -1.57
CASC19-238	ENST00000641523	TMED6	Q8WW62	240 aa		5.24	□□□□□ -1.57
CASC19-238	ENST00000641523	SGTB	Q96EQ0	304 aa		5.24	□□□□□ -1.57
CASC19-238	ENST00000641523	THOC1	Q96FV9	657 aa	Known RBP	5.24	□□□□□ -1.57
CASC19-238	ENST00000641523	FOXN4	Q96NZ1	517 aa		5.24	□□□□□ -1.57
CASC19-238	ENST00000641523	KRTAP4-11	Q9BYQ6	195 aa		5.24	□□□□□ -1.57
CASC19-238	ENST00000641523	BCL2L14	Q9BZR8	327 aa		5.24	□□□□□ -1.57
CASC19-238	ENST00000641523	BPESC1	Q9GZL8	116 aa		5.24	□□□□□ -1.57
CASC19-238	ENST00000641523	RNF121	Q9H920	327 aa		5.24	□□□□□ -1.57
CASC19-238	ENST00000641523	INIP	Q9NRY2	104 aa		5.24	□□□□□ -1.57
CASC19-238	ENST00000641523	TMEM38B	Q9NVV0	291 aa		5.24	□□□□□ -1.57
CASC19-238	ENST00000641523	PIPOX	Q9P0Z9	390 aa		5.24	□□□□□ -1.57
CASC19-238	ENST00000641523	MED31	Q9Y3C7	131 aa		5.24	□□□□□ -1.57
CASC19-238	ENST00000641523	FBN1	P35555	2871 aa	Known RBP	5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	TRAV18	A0A075B6X5	111 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	LOC105371242	A0A075B767	164 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	FAM220BP	B1ANY3	271 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	BLOC1S5-TXNDC5	H3BN57	136 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	TMEM178B	H3BS89	294 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	KPNA4	O00629	521 aa	Predicted RBP	5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	NBR2	O15453	112 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	OR7A10	O76100	309 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	LY6H	O94772	140 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	ADRA2A	P08913	450 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	PGA4	P0DJD7	388 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	PGA3	P0DJD8	388 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	MYOD1	P15172	320 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	LAP3	P28838	519 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	CD80	P33681	288 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	ARHGDIA	P52565	204 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	TMEM33	P57088	247 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	EXOSC2	Q13868	293 aa	Known RBP	5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	TWIST1	Q15672	202 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	LIPN	Q5VXI9	398 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	ZNF841	Q6ZN19	808 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	CALHM3	Q86XJ0	350 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	ODF3L1	Q8IXM7	274 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	OR2T12	Q8NG77	320 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	SCARB1	Q8WTV0	552 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	TMEM239	Q8WW34	195 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	C11orf40	Q8WZ69	217 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	RDH5	Q92781	318 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	BTBD10	Q9BSF8	475 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	FUNDC2	Q9BWH2	189 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	RSPO3	Q9BXY4	272 aa	Predicted RBP	5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	PRRG3	Q9BZD7	231 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	MFF	Q9GZY8	342 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	SIAE	Q9HAT2	523 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	MAN2C1	Q9NTJ4	1040 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	UFSP2	Q9NUQ7	469 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	TAS2R5	Q9NYW4	299 aa		5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	ANK3	Q12955	4377 aa	Known RBP	5.23	□□□□□ -1.57
CASC19-238	ENST00000641523	IGHV4-61	A0A0C4DH41	118 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	SH3PXD2B	A1X283	911 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523		A6NIZ1	184 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523		B4DSR2	109 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	LRRN3	E7EW58	273 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523		H3BSA7	217 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	FXYD1	O00168	92 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	FBP2	O00757	339 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	PHF1	O43189	567 aa	Predicted RBP	5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	CCDC22	O60826	627 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	LYPD3	O95274	346 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	CST1	P01037	141 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	IFNW1	P05000	195 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	IRF2	P14316	349 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	ACADS	P16219	412 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	IGFBP5	P24593	272 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	RRM2	P31350	389 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	APLNR	P35414	380 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	GPR6	P46095	362 aa	Predicted RBP	5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	GZMM	P51124	257 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	KLF3	P57682	345 aa	Predicted RBP	5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	RAP1B	P61224	184 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	PCBD1	P61457	104 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	RAP1A	P62834	184 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	RPL18	Q07020	188 aa	Known RBP	5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	HIST3H3	Q16695	136 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	LINC01620	Q4KN68	170 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	CYBRD1	Q53TN4	286 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	C10orf128	Q5T292	105 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	ARL9	Q6T311	187 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	DPY19L4	Q7Z388	723 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	MYPOP	Q86VE0	399 aa	Predicted RBP	5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	CYP4Z1	Q86W10	505 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	RBM45	Q8IUH3	476 aa	Known RBP	5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	SKA3	Q8IX90	412 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	CDK20	Q8IZL9	346 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	SLC38A6	Q8IZM9	456 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	ZNF114	Q8NC26	417 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	OR4K5	Q8NGD3	323 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	OR1L4	Q8NGR5	311 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	ZNF519	Q8TB69	540 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	C10orf82	Q8WW14	230 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	GEMIN6	Q8WXD5	167 aa	Known RBP	5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	RBP7	Q96R05	134 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	PRSS27	Q9BQR3	290 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	WFDC6	Q9BQY6	131 aa		5.22	□□□□□ -1.57
CASC19-238	ENST00000641523	WAC	Q9BTA9	647 aa		5.22	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms