RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	FOXJ3	Q9UPW0	622 aa		12.37	□□□□□ -0.43
NRXN1-222	ENST00000625672	BRWD1	Q9NSI6	2320 aa		12.37	□□□□□ -0.43
NRXN1-222	ENST00000625672	CALCR	P30988	508 aa		12.37	□□□□□ -0.43
NRXN1-222	ENST00000625672	OR3A1	P47881	315 aa		12.37	□□□□□ -0.43
NRXN1-222	ENST00000625672	GPR137	Q96N19	417 aa		12.37	□□□□□ -0.43
NRXN1-222	ENST00000625672	LAMB4	A4D0S4	1761 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	GCG	P01275	180 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	C3AR1	Q16581	482 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672		Q6ZN92	141 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	SYS1	Q8N2H4	156 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	ZMIZ1	Q9ULJ6	1067 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	IGHV5-51	A0A0C4DH38	117 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	PPM1D	O15297	605 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	KISS1	Q15726	138 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	TBC1D26	Q86UD7	250 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	OR52B4	Q8NGK2	314 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	GPBAR1	Q8TDU6	330 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	FAAP24	Q9BTP7	215 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	SMAGP	Q0VAQ4	97 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	C19orf54	Q5BKX5	351 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672		Q8WTZ3	238 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	FLYWCH2	Q96CP2	140 aa	Known RBP	12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	ORAI1	Q96D31	301 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	WNT1	P04628	370 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	GCSH	P23434	173 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	ZNF547	Q8IVP9	402 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	C10orf90	Q96M02	699 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	RER1	O15258	196 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	CCR2	P41597	374 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	OR4S2	Q8NH73	311 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	AKR7A2	O43488	359 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	DHRS3	O75911	302 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	ACAA2	P42765	397 aa	Known RBP	12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	KIR3DL2	P43630	455 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	CEBPE	Q15744	281 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	RNF212	Q495C1	297 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	CGB2	Q6NT52	195 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672		Q7L0L9	218 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	ZNF429	Q86V71	674 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	MUC15	Q8N387	334 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	MED30	Q96HR3	178 aa		12.36	□□□□□ -0.43
NRXN1-222	ENST00000625672	C19orf57	Q0VDD7	668 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	BAK1	Q16611	211 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	MOGAT3	Q86VF5	341 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	OR8I2	Q8N0Y5	310 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	LOXL3	P58215	753 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	DTD1	Q8TEA8	209 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	CSN3	P07498	182 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	HIST1H1E	P10412	219 aa	Known RBP	12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	GALNS	P34059	522 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	GUCA2A	Q02747	115 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	OTUD1	Q5VV17	481 aa	Predicted RBP	12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	TIMP4	Q99727	224 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	AUNIP	Q9H7T9	357 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672		M0R3E3	92 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	TFPI2	P48307	235 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	ROM1	Q03395	351 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	VSTM2A	Q8TAG5	236 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	P2RX4	Q99571	388 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	GLRX2	Q9NS18	164 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	FAM53C	Q9NYF3	392 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	IGHA1	P01876	353 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	IGHA2	P01877	340 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	DCTD	P32321	178 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	SLC37A1	P57057	533 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	FABP5	Q01469	135 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	RELL2	Q8NC24	303 aa	Predicted RBP	12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	SLC26A10	Q8NG04	563 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	FMOD	Q06828	376 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	GSX1	Q9H4S2	264 aa	Predicted RBP	12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	PPOX	P50336	477 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	UBE2L3	P68036	154 aa	Known RBP	12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	TMEM128	Q5BJH2	165 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	CLEC9A	Q6UXN8	241 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	CDX2	Q99626	313 aa	Predicted RBP	12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	CACNG5	Q9UF02	275 aa		12.35	□□□□□ -0.43
NRXN1-222	ENST00000625672	SLC35B1	P78383	322 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	TOMM20L	Q6UXN7	152 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	TMEM229B	Q8NBD8	167 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	OR4C16	Q8NGL9	310 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	ARHGAP5-AS1	Q96IT6	56 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	LHX9	Q9NQ69	397 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	KCNE3	Q9Y6H6	103 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	DERL3	Q96Q80	235 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	FCN1	O00602	326 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	DLEU7	Q6UYE1	221 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	DUSP18	Q8NEJ0	188 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	OTOS	Q8NHW6	89 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	VDAC1	P21796	283 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	ZNF117	Q03924	483 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	C3orf85	A0A1B0GTC6	90 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	MRPS11	P82912	194 aa	Known RBP	12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	OR10C1	Q96KK4	312 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	ZNF552	Q9H707	407 aa	Predicted RBP	12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	ZAR1L	A6NP61	321 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	ZNF737	O75373	536 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	MELTF	P08582	738 aa		12.34	□□□□□ -0.43
NRXN1-222	ENST00000625672	SPINK2	P20155	84 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms