RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 NLRC3Q7RTR2 1065 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 SVOPQ8N4V2 548 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 CD177Q8N6Q3 437 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 DNTTIP1Q9H147 329 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 CLN8Q9UBY8 286 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 METRNQ9UJH8 293 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 FOXJ3Q9UPW0 622 aa11.89□□□□□ -0.51
CBWD3-217ENST00000621474 RFPL4AA6NLU0 287 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 C22orf46C9J442 243 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 RFPL4AL1F8VTS6 287 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 DVL1O14640 695 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 KDM4BO94953 1096 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 AVPP01185 164 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 ADRA2CP18825 462 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 BDKRB2P30411 391 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 GABRA5P31644 462 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 PPP3R1P63098 170 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 FABP5Q01469 135 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 DDI2Q5TDH0 399 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 C1orf229Q6ZS94 237 aaPredicted RBP11.88□□□□□ -0.51
CBWD3-217ENST00000621474 GLCCI1Q86VQ1 547 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 ZNRF1Q8ND25 227 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 TMEM160Q9NX00 188 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 NDUFB11Q9NX14 153 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 KCNS2Q9ULS6 477 aa11.88□□□□□ -0.51
CBWD3-217ENST00000621474 NAV3Q8IVL0 2385 aa11.87□□□□□ -0.51
CBWD3-217ENST00000621474 TRAV20A0A0B4J274 112 aa11.87□□□□□ -0.51
CBWD3-217ENST00000621474 PPIAL4CA0A0B4J2A2 164 aa11.87□□□□□ -0.51
CBWD3-217ENST00000621474 SIGLEC5O15389 551 aa11.87□□□□□ -0.51
CBWD3-217ENST00000621474 MAS1P04201 325 aa11.87□□□□□ -0.51
CBWD3-217ENST00000621474 UCHL1P09936 223 aa11.87□□□□□ -0.51
CBWD3-217ENST00000621474 CALCBP10092 127 aa11.87□□□□□ -0.51
CBWD3-217ENST00000621474 MAPK3P27361 379 aaPredicted RBP11.87□□□□□ -0.51
CBWD3-217ENST00000621474 ZNF93P35789 620 aaPredicted RBP11.87□□□□□ -0.51
CBWD3-217ENST00000621474 OR3A4PP47883 348 aa11.87□□□□□ -0.51
CBWD3-217ENST00000621474 SLC36A1Q7Z2H8 476 aa11.87□□□□□ -0.51
CBWD3-217ENST00000621474 MKXQ8IYA7 352 aa11.87□□□□□ -0.51
CBWD3-217ENST00000621474 SAXO1Q8IYX7 474 aa11.87□□□□□ -0.51
CBWD3-217ENST00000621474 SDSLQ96GA7 329 aa11.87□□□□□ -0.51
CBWD3-217ENST00000621474 TMPRSS13Q9BYE2 586 aa11.87□□□□□ -0.51
CBWD3-217ENST00000621474 NF1P21359 2839 aa11.87□□□□□ -0.51
CBWD3-217ENST00000621474 MAGEB3O15480 346 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 TNFAIP8O95379 198 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 KNG1P01042 644 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 NPY4RP50391 375 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 IKZF1Q13422 519 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 CR1LQ2VPA4 569 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 SYT6Q5T7P8 510 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-217ENST00000621474 CD200R1LQ6Q8B3 271 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 ASCL4Q6XD76 172 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 CEACAM19Q7Z692 300 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 LRRTM1Q86UE6 522 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 SATL1Q86VE3 508 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 Q8IYB0 196 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 ZSCAN4Q8NAM6 433 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-217ENST00000621474 PXT1Q8NFP0 134 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 FCGR1BQ92637 280 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 THRSPQ92748 146 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 ZNF696Q9H7X3 374 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 CKLFQ9UBR5 152 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 MXRA5Q9NR99 2828 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 PSMA1P25786 263 aaKnown RBP11.86□□□□□ -0.51
CBWD3-217ENST00000621474 PSMB9P28065 219 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 GABRA2P47869 451 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 IL13RA1P78552 427 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 ZNF146Q15072 292 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 TRAM1Q15629 374 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 FAM120AOSQ5T036 256 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 IL17RELQ6ZVW7 336 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 FAM58AQ8N1B3 248 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 TNFAIP8L1Q8WVP5 186 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 EMG1Q92979 244 aaKnown RBP11.86□□□□□ -0.51
CBWD3-217ENST00000621474 NEK6Q9HC98 313 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 HMG20AQ9NP66 347 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 OR14J1Q9UGF5 321 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 INSIG2Q9Y5U4 225 aa11.86□□□□□ -0.51
CBWD3-217ENST00000621474 IGHV2-70DA0A0C4DH43 119 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 A0A0G2JMP0 313 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 A0A0X1KG70 313 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 SHISA3A0PJX4 238 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 TRIM64CA6NLI5 447 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 CCRL2O00421 344 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 RGS9O75916 674 aaPredicted RBP11.85□□□□□ -0.51
CBWD3-217ENST00000621474 TMEM225BP0DP42 221 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 CD37P11049 281 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 SRMP19623 302 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 PRDX2P32119 198 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 PTGFRP43088 359 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 NEDD8Q15843 81 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 DCAF12L2Q5VW00 463 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 FAHD2BQ6P2I3 314 aaPredicted RBP11.85□□□□□ -0.51
CBWD3-217ENST00000621474 Q8NFD4 153 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 OR4M2Q8NGB6 313 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 RAB40AQ8WXH6 277 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 FAHD2AQ96GK7 314 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 C1orf147Q96MC9 270 aaPredicted RBP11.85□□□□□ -0.51
CBWD3-217ENST00000621474 GPER1Q99527 375 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 GFI1Q99684 422 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 CNTD2Q9H8S5 307 aa11.85□□□□□ -0.51
CBWD3-217ENST00000621474 OR5V1Q9UGF6 321 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms