RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 NKX3-1Q99801 234 aaPredicted RBP11.98□□□□□ -0.49
VRK3-213ENST00000597215 UQCC2Q9BRT2 126 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 METTL9Q9H1A3 318 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 ELL3Q9HB65 397 aaPredicted RBP11.98□□□□□ -0.49
VRK3-213ENST00000597215 RBFOX1Q9NWB1 397 aaKnown RBP11.98□□□□□ -0.49
VRK3-213ENST00000597215 GSTK1Q9Y2Q3 226 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 ABCA2Q9BZC7 2435 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 ABCA1O95477 2261 aa11.98□□□□□ -0.49
VRK3-213ENST00000597215 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.97□□□□□ -0.494e-10■■■■■ 37.9
VRK3-213ENST00000597215 IGKV1D-17A0A075B6S4 117 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 TRAV1-2A0A0B4J238 106 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 RFPL4AA6NLU0 287 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 RFPL4AL1F8VTS6 287 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 F8VVB4 439 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 F8VWA3 439 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 FOXH1O75593 365 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 SFTPBP07988 381 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 PRKACAP17612 351 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 GADD45AP24522 165 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 GABRA2P47869 451 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 MTNR1BP49286 362 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 NPY4RP50391 375 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 GNB2P62879 340 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 RSU1Q15404 277 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 ASCL4Q6XD76 172 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 ZNF788Q6ZQV5 615 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 C1QL2Q7Z5L3 287 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 LYPD6Q86Y78 171 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 MSI2Q96DH6 328 aaKnown RBP11.97□□□□□ -0.49
VRK3-213ENST00000597215 MED30Q96HR3 178 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 CCL13Q99616 98 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 CHCHD6Q9BRQ6 235 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 SSBP3Q9BWW4 388 aaPredicted RBP11.97□□□□□ -0.49
VRK3-213ENST00000597215 OR51E2Q9H255 320 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 CNTD2Q9H8S5 307 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 HMG20AQ9NP66 347 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 PCDHB16Q9NRJ7 776 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 TXNL4BQ9NX01 149 aaKnown RBP11.97□□□□□ -0.49
VRK3-213ENST00000597215 IL36GQ9NZH8 169 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 CTSZQ9UBR2 303 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 CLN8Q9UBY8 286 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 ZNF222Q9UK12 451 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 ING4Q9UNL4 249 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 MRPS28Q9Y2Q9 187 aaKnown RBP11.97□□□□□ -0.49
VRK3-213ENST00000597215 DOCK11Q5JSL3 2073 aa11.97□□□□□ -0.49
VRK3-213ENST00000597215 A8MXK9 166 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 PDCD5O14737 125 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 SIGLEC5O15389 551 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 CD5LO43866 347 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 CDRT1O95170 752 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 MSMBP08118 114 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 ZNF16P17020 682 aaPredicted RBP11.96□□□□□ -0.49
VRK3-213ENST00000597215 AMY2BP19961 511 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 PSMD7P51665 324 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 FGF12P61328 243 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 SEC61A1P61619 476 aaKnown RBP11.96□□□□□ -0.49
VRK3-213ENST00000597215 IL13RA1P78552 427 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 KRTAP1-1Q07627 177 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 SPIN3Q5JUX0 258 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 AWAT2Q6E213 333 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 ELP2Q6IA86 826 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 FAM216BQ8N7L0 139 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 YIPF6Q96EC8 236 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 SDSLQ96GA7 329 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 GAFA1Q96PS6 74 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 LPAR2Q9HBW0 351 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 OR14J1Q9UGF5 321 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 GLS2Q9UI32 602 aa11.96□□□□□ -0.49
VRK3-213ENST00000597215 MALRD1Q5VYJ5 2156 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 ZANQ9Y493 2812 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 LOC100506127A0A0U1RQW1 187 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 DVL1O14640 695 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 PHF1O43189 567 aaPredicted RBP11.95□□□□□ -0.5
VRK3-213ENST00000597215 NDUFB3O43676 98 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 ZNF780AO75290 641 aaPredicted RBP11.95□□□□□ -0.5
VRK3-213ENST00000597215 HTR3BO95264 441 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 CSTBP04080 98 aaKnown RBP11.95□□□□□ -0.5
VRK3-213ENST00000597215 TFF1P04155 84 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 CALCBP10092 127 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 CD37P11049 281 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 PRDX2P32119 198 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 LCN2P80188 198 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 IKZF1Q13422 519 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 GPR176Q14439 515 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 ZNF146Q15072 292 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 LRRC10Q5BKY1 277 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 C1orf100Q5SVJ3 147 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 WDR25Q64LD2 544 aaPredicted RBP11.95□□□□□ -0.5
VRK3-213ENST00000597215 FAM166AQ6J272 317 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 GLIPR1L1Q6UWM5 242 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 CLEC9AQ6UXN8 241 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 ZNF841Q6ZN19 808 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 GDPGP1Q6ZNW5 385 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 GLCCI1Q86VQ1 547 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 ZNF561Q8N587 486 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 CD177Q8N6Q3 437 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 OR4D6Q8NGJ1 314 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 OR13F1Q8NGS4 319 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 OR10K1Q8NGX5 313 aa11.95□□□□□ -0.5
VRK3-213ENST00000597215 TBC1D15Q8TC07 691 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms