RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 GLT8D1Q68CQ7 371 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 ELP2Q6IA86 826 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 CLEC9AQ6UXN8 241 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 ZNF788Q6ZQV5 615 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 LYPD6Q86Y78 171 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 OR5T2Q8NGG2 359 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 SDSLQ96GA7 329 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 S100A13Q99584 98 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 CCL13Q99616 98 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 SSBP3Q9BWW4 388 aaPredicted RBP15.97■□□□□ 0.15
DDX39A-204ENST00000586558 MRPS26Q9BYN8 205 aaKnown RBP15.97■□□□□ 0.15
DDX39A-204ENST00000586558 FAM192AQ9GZU8 254 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 SEBOXQ9HB31 216 aaPredicted RBP15.97■□□□□ 0.15
DDX39A-204ENST00000586558 HMG20AQ9NP66 347 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 PCDHB16Q9NRJ7 776 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 RBFOX1Q9NWB1 397 aaKnown RBP15.97■□□□□ 0.15
DDX39A-204ENST00000586558 IL36GQ9NZH8 169 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 CLN8Q9UBY8 286 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 SSR3Q9UNL2 185 aa15.97■□□□□ 0.15
DDX39A-204ENST00000586558 POLR3KQ9Y2Y1 108 aaPredicted RBP15.97■□□□□ 0.15
DDX39A-204ENST00000586558 CSPG4Q6UVK1 2322 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 TRAV1-2A0A0B4J238 106 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 TRAV20A0A0B4J274 112 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 F8VVB4 439 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 F8VWA3 439 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 SIGLEC5O15389 551 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 LY6G6DO95868 133 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 CD36P16671 472 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 MTNR1BP49286 362 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 GNB2P62879 340 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 RSU1Q15404 277 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 TIMM50Q3ZCQ8 353 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 SPIN3Q5JUX0 258 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 ZNF841Q6ZN19 808 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 METTL9Q9H1A3 318 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 CTSZQ9UBR2 303 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 GSTK1Q9Y2Q3 226 aa15.96■□□□□ 0.15
DDX39A-204ENST00000586558 TLN2Q9Y4G6 2542 aa15.96■□□□□ 0.14
DDX39A-204ENST00000586558 PPIAL4CA0A0B4J2A2 164 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 RFPL4AA6NLU0 287 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 RFPL4AL1F8VTS6 287 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 GPR37O15354 613 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 ZNF780AO75290 641 aaPredicted RBP15.95■□□□□ 0.14
DDX39A-204ENST00000586558 TGFAP01135 160 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 SFTPBP07988 381 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 CD37P11049 281 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 ZNF16P17020 682 aaPredicted RBP15.95■□□□□ 0.14
DDX39A-204ENST00000586558 PRKACAP17612 351 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 AMY2BP19961 511 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 MYL9P24844 172 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 PRDX2P32119 198 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 GABRA2P47869 451 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 PSMD7P51665 324 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 DVL1P1P54792 670 aaPredicted RBP15.95■□□□□ 0.14
DDX39A-204ENST00000586558 SEC61A1P61619 476 aaKnown RBP15.95■□□□□ 0.14
DDX39A-204ENST00000586558 GPR176Q14439 515 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 ZNF146Q15072 292 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 WDR25Q64LD2 544 aaPredicted RBP15.95■□□□□ 0.14
DDX39A-204ENST00000586558 FAM166AQ6J272 317 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 C1QL2Q7Z5L3 287 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 GLCCI1Q86VQ1 547 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 BATF2Q8N1L9 274 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 Q8NFD4 153 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 GAFA1Q96PS6 74 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 SMR3AQ99954 134 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 CNTD2Q9H8S5 307 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 ELL3Q9HB65 397 aaPredicted RBP15.95■□□□□ 0.14
DDX39A-204ENST00000586558 EXOSC4Q9NPD3 245 aaKnown RBP15.95■□□□□ 0.14
DDX39A-204ENST00000586558 GLS2Q9UI32 602 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 MRPS28Q9Y2Q9 187 aaKnown RBP15.95■□□□□ 0.14
DDX39A-204ENST00000586558 ABCA2Q9BZC7 2435 aa15.95■□□□□ 0.14
DDX39A-204ENST00000586558 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.94■□□□□ 0.144e-7■■■■■ 63.7
DDX39A-204ENST00000586558 MTORP42345 2549 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 KIAA1324LA8MWY0 1029 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-204ENST00000586558 DVL1O14640 695 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 PDCD5O14737 125 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 NDUFB3O43676 98 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 RANBP1P43487 201 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 FGF12P61328 243 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 LCN2P80188 198 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 LRRC10Q5BKY1 277 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 C1orf100Q5SVJ3 147 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 C22orf42Q6IC83 251 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 GDPGP1Q6ZNW5 385 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 ZNF561Q8N587 486 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 CD177Q8N6Q3 437 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 FAM216BQ8N7L0 139 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 TBC1D15Q8TC07 691 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 TMEM186Q96B77 213 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 LPAR2Q9HBW0 351 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 TXNL4BQ9NX01 149 aaKnown RBP15.94■□□□□ 0.14
DDX39A-204ENST00000586558 GHRLQ9UBU3 117 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 OR5V1Q9UGF6 321 aa15.94■□□□□ 0.14
DDX39A-204ENST00000586558 ZNF469Q96JG9 3925 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-204ENST00000586558 ABCA1O95477 2261 aa15.93■□□□□ 0.14
DDX39A-204ENST00000586558 MED13LQ71F56 2210 aa15.93■□□□□ 0.14
DDX39A-204ENST00000586558 PHF1O43189 567 aaPredicted RBP15.93■□□□□ 0.14
DDX39A-204ENST00000586558 CDRT1O95170 752 aa15.93■□□□□ 0.14
DDX39A-204ENST00000586558 ECDO95905 644 aaPredicted RBP15.93■□□□□ 0.14
DDX39A-204ENST00000586558 CSTBP04080 98 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms