RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 OR5T2Q8NGG2 359 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 OR13C5Q8NGS8 318 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 ANGPTL6Q8NI99 470 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 MUL1Q969V5 352 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 SEH1LQ96EE3 360 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 GPER1Q99527 375 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 CCL13Q99616 98 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 MGLLQ99685 303 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 HES4Q9HCC6 221 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 SNTG1Q9NSN8 517 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 MTCH1Q9NZJ7 389 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 CTSZQ9UBR2 303 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 GLS2Q9UI32 602 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 RFPL4AA6NLU0 287 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 RFPL4AL1F8VTS6 287 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 DVL1O14640 695 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 SIGLEC5O15389 551 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 PLATP00750 562 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 LIPFP07098 398 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 TMEM225BP0DP42 221 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 CPEP16870 476 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 IGFBP3P17936 291 aaPredicted RBP9.17□□□□□ -0.94
CHD3-216ENST00000573936 FSTP19883 344 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 PSMB9P28065 219 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 PRDX2P32119 198 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 BMXP51813 675 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 GP2P55259 537 aaKnown RBP9.17□□□□□ -0.94
CHD3-216ENST00000573936 IL13RA1P78552 427 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 ACSM3Q53FZ2 586 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 LIPKQ5VXJ0 399 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 FAHD2BQ6P2I3 314 aaPredicted RBP9.17□□□□□ -0.94
CHD3-216ENST00000573936 ZNF788Q6ZQV5 615 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 SATL1Q86VE3 508 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 CDH26Q8IXH8 852 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 ZNF561Q8N587 486 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 PNLDC1Q8NA58 520 aaKnown RBP9.17□□□□□ -0.94
CHD3-216ENST00000573936 RAB40AQ8WXH6 277 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 PHYHIPQ92561 330 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 SLAMF9Q96A28 289 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 RFT1Q96AA3 541 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 SDSLQ96GA7 329 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 FAHD2AQ96GK7 314 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 DMRTB1Q96MA1 342 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 ZNF488Q96MN9 340 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 DERL3Q96Q80 235 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 SPACA5Q96QH8 159 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 OR14A2Q96R54 314 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 MRI1Q9BV20 369 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 TMED9Q9BVK6 235 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 SEBOXQ9HB31 216 aaPredicted RBP9.17□□□□□ -0.94
CHD3-216ENST00000573936 SMURF1Q9HCE7 757 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 VCX3AQ9NNX9 186 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 SCOCQ9UIL1 159 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 INSIG2Q9Y5U4 225 aa9.17□□□□□ -0.94
CHD3-216ENST00000573936 YLPM1P49750 1951 aaKnown RBP9.17□□□□□ -0.94
CHD3-216ENST00000573936 IGKV1D-17A0A075B6S4 117 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 IGHV2-70DA0A0C4DH43 119 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 KIR2DS1A0A191URI9 304 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 MEGF11A6BM72 1044 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 SPRY1O43609 319 aaPredicted RBP9.16□□□□□ -0.94
CHD3-216ENST00000573936 ENSAO43768 121 aaKnown RBP9.16□□□□□ -0.94
CHD3-216ENST00000573936 KDM4BO94953 1096 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 TFAP2AP05549 437 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 CHRM2P08172 466 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 ZNF93P35789 620 aaPredicted RBP9.16□□□□□ -0.94
CHD3-216ENST00000573936 ALDH3B2P48448 385 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 CAV3P56539 151 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 ARMCX4Q5H9R4 360 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 FAM120AOSQ5T036 256 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 SYT6Q5T7P8 510 aaPredicted RBP9.16□□□□□ -0.94
CHD3-216ENST00000573936 DDI2Q5TDH0 399 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 FAM58AQ8N1B3 248 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 PXT1Q8NFP0 134 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 OR52N4Q8NGI2 321 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 OR51A2Q8NGJ7 313 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 ST8SIA4Q92187 359 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 EMG1Q92979 244 aaKnown RBP9.16□□□□□ -0.94
CHD3-216ENST00000573936 GAFA1Q96PS6 74 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 S100A13Q99584 98 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 NUDT16L1Q9BRJ7 211 aaKnown RBP9.16□□□□□ -0.94
CHD3-216ENST00000573936 C7orf69Q9H7B7 122 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 TCF7L1Q9HCS4 588 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 NOX4Q9NPH5 578 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 PCDHB16Q9NRJ7 776 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 ZNF222Q9UK12 451 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 MALRD1Q5VYJ5 2156 aa9.16□□□□□ -0.94
CHD3-216ENST00000573936 AMY2BP19961 511 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 BCL3P20749 454 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 GABRA5P31644 462 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 SRP14P37108 136 aaKnown RBP9.15□□□□□ -0.94
CHD3-216ENST00000573936 PTGFRP43088 359 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 ZP1P60852 638 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 PAX2Q02962 417 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 SCGB2A2Q13296 93 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 IKZF1Q13422 519 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 SSX1Q16384 188 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 SPIN3Q5JUX0 258 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 ASPHD2Q6ICH7 369 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 BTN2A1Q7KYR7 527 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 CEACAM19Q7Z692 300 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms