RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 SLAMF9Q96A28 289 aa14.18□□□□□ -0.14
SMG6-214ENST00000573827 CEP19Q96LK0 163 aa14.18□□□□□ -0.14
SMG6-214ENST00000573827 PLEKHA1Q9HB21 404 aa14.18□□□□□ -0.14
SMG6-214ENST00000573827 SEBOXQ9HB31 216 aaPredicted RBP14.18□□□□□ -0.14
SMG6-214ENST00000573827 S100A14Q9HCY8 104 aa14.18□□□□□ -0.14
SMG6-214ENST00000573827 OR14J1Q9UGF5 321 aa14.18□□□□□ -0.14
SMG6-214ENST00000573827 SLC7A11Q9UPY5 501 aa14.18□□□□□ -0.14
SMG6-214ENST00000573827 CAB39Q9Y376 341 aaPredicted RBP14.18□□□□□ -0.14
SMG6-214ENST00000573827 DNAH3Q8TD57 4116 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 C17orf98A8MV24 154 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 H0YAE9 185 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 CLPXO76031 633 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 IGHA1P01876 353 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 CRYBA1P05813 215 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 COL10A1Q03692 680 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 BLMHQ13867 455 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 TMEM244Q5VVB8 128 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 GDPGP1Q6ZNW5 385 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 SLC25A26Q70HW3 274 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 FAM220AQ7Z4H9 259 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 ACBD7Q8N6N7 88 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 MEGF9Q9H1U4 602 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 C16orf95Q9H693 158 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 MYRFQ9Y2G1 1151 aa14.17□□□□□ -0.14
SMG6-214ENST00000573827 SF3B6Q9Y3B4 125 aaKnown RBP14.17□□□□□ -0.14
SMG6-214ENST00000573827 DAPL1A0PJW8 107 aa14.16□□□□□ -0.14
SMG6-214ENST00000573827 TSPAN9O75954 239 aa14.16□□□□□ -0.14
SMG6-214ENST00000573827 PAX6P26367 422 aa14.16□□□□□ -0.14
SMG6-214ENST00000573827 NPBWR2P48146 333 aa14.16□□□□□ -0.14
SMG6-214ENST00000573827 LDLRAD2Q5SZI1 272 aa14.16□□□□□ -0.14
SMG6-214ENST00000573827 C17orf107Q6ZR85 190 aa14.16□□□□□ -0.14
SMG6-214ENST00000573827 OR5R1Q8NH85 324 aa14.16□□□□□ -0.14
SMG6-214ENST00000573827 PIFOQ8TCI5 191 aa14.16□□□□□ -0.14
SMG6-214ENST00000573827 APH1BQ8WW43 257 aa14.16□□□□□ -0.14
SMG6-214ENST00000573827 MRPS18AQ9NVS2 196 aaKnown RBP14.16□□□□□ -0.14
SMG6-214ENST00000573827 ORC6Q9Y5N6 252 aa14.16□□□□□ -0.14
SMG6-214ENST00000573827 GMPPBQ9Y5P6 360 aa14.16□□□□□ -0.14
SMG6-214ENST00000573827 IGKV1-12A0A0C4DH73 117 aa14.15□□□□□ -0.14
SMG6-214ENST00000573827 FAM90A8PA6NJQ4 464 aa14.15□□□□□ -0.14
SMG6-214ENST00000573827 ANGPTL7O43827 346 aa14.15□□□□□ -0.14
SMG6-214ENST00000573827 IGKV1D-12P01611 117 aa14.15□□□□□ -0.14
SMG6-214ENST00000573827 DBTP11182 482 aaKnown RBP14.15□□□□□ -0.14
SMG6-214ENST00000573827 ATF1P18846 271 aa14.15□□□□□ -0.14
SMG6-214ENST00000573827 AANATQ16613 207 aa14.15□□□□□ -0.14
SMG6-214ENST00000573827 PQLC1Q8N2U9 271 aa14.15□□□□□ -0.14
SMG6-214ENST00000573827 OR52N4Q8NGI2 321 aa14.15□□□□□ -0.14
SMG6-214ENST00000573827 FGGYQ96C11 551 aa14.15□□□□□ -0.14
SMG6-214ENST00000573827 BORCS8Q96FH0 119 aa14.15□□□□□ -0.14
SMG6-214ENST00000573827 C4orf36Q96KX1 117 aa14.15□□□□□ -0.14
SMG6-214ENST00000573827 C9orf16Q9BUW7 83 aa14.15□□□□□ -0.14
SMG6-214ENST00000573827 ADI1Q9BV57 179 aa14.15□□□□□ -0.14
SMG6-214ENST00000573827 ISG20L2Q9H9L3 353 aaKnown RBP14.15□□□□□ -0.14
SMG6-214ENST00000573827 RBFOX1Q9NWB1 397 aaKnown RBP14.15□□□□□ -0.14
SMG6-214ENST00000573827 RNF114Q9Y508 228 aa14.15□□□□□ -0.14
SMG6-214ENST00000573827 TRBV2A0A0J9YWF9 115 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 ODF3BA8MYP8 253 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 E9PI62 339 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 WIPF1O43516 503 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 SERPINA3P01011 423 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 MT-ND2P03891 347 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 CHRM2P08172 466 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 PIPP12273 146 aaPredicted RBP14.14□□□□□ -0.15
SMG6-214ENST00000573827 AZGP1P25311 298 aaKnown RBP14.14□□□□□ -0.15
SMG6-214ENST00000573827 RBP2P50120 134 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 BMXP51813 675 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 GALEQ14376 348 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 ZNF146Q15072 292 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 CNN3Q15417 329 aaKnown RBP14.14□□□□□ -0.15
SMG6-214ENST00000573827 TREML4Q6UXN2 200 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 LHFPL3Q86UP9 236 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 EGFL6Q8IUX8 553 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 OR8H2Q8N162 312 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 DYNAPQ8N1N2 210 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 SYS1Q8N2H4 156 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 PPP1R35Q8TAP8 253 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 AMBNQ9NP70 447 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 FAM118AQ9NWS6 357 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 NOTCH3Q9UM47 2321 aa14.14□□□□□ -0.15
SMG6-214ENST00000573827 LOC100130705A0A1B0GUX0 176 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 MEX3AA1L020 520 aaKnown RBP14.13□□□□□ -0.15
SMG6-214ENST00000573827 H3BUX3 64 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 J3QLW9 94 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 PSPNO60542 156 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 WBP4O75554 376 aaKnown RBP14.13□□□□□ -0.15
SMG6-214ENST00000573827 INMTO95050 263 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 HAND1O96004 215 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 PAHP00439 452 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 HTR1AP08908 422 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 ZNF19P17023 458 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 BCL3P20749 454 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 PDZK1IP1Q13113 114 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 ALKBH1Q13686 389 aaKnown RBP14.13□□□□□ -0.15
SMG6-214ENST00000573827 ASPHD2Q6ICH7 369 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 ZNF782Q6ZMW2 699 aaPredicted RBP14.13□□□□□ -0.15
SMG6-214ENST00000573827 ZBTB49Q6ZSB9 765 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 ASCC1Q8N9N2 400 aaKnown RBP14.13□□□□□ -0.15
SMG6-214ENST00000573827 SPSB1Q96BD6 273 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 SNX22Q96L94 193 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 ALG8Q9BVK2 526 aa14.13□□□□□ -0.15
SMG6-214ENST00000573827 HEXA-AS1Q9H8Q6 139 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms