RNA–Protein interactions for RNA: ENST00000565688.5

CLN3-218, Transcript of CLN3, battenin, humanhuman

TSL 3

Gene CLN3, Length 650 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-218ENST00000565688 A0A1W2PQL4 384 aaPredicted RBP15.15■□□□□ 0.02
CLN3-218ENST00000565688 ODF3BA8MYP8 253 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 ARG1P05089 322 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 VSIG10L2P0DP72 767 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 FCGR1AP12314 374 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 EDDM3BP56851 147 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 MEF2CQ06413 473 aaPredicted RBP15.15■□□□□ 0.02
CLN3-218ENST00000565688 TMED1Q13445 227 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 UBE2V2Q15819 145 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 ODF4Q2M2E3 257 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 LHFPL4Q7Z7J7 247 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 Q8IYB0 196 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 OR8H2Q8N162 312 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 OR11H6Q8NGC7 330 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 RPS4Y2Q8TD47 263 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 NKX3-1Q99801 234 aaPredicted RBP15.15■□□□□ 0.02
CLN3-218ENST00000565688 CHST5Q9GZS9 411 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 SEBOXQ9HB31 216 aaPredicted RBP15.15■□□□□ 0.02
CLN3-218ENST00000565688 PITPNC1Q9UKF7 332 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 TCF19Q9Y242 345 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 AP4S1Q9Y587 144 aa15.15■□□□□ 0.02
CLN3-218ENST00000565688 IGHV1-8P0DP01 117 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 ATP6V1E1P36543 226 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 FAM189A2Q15884 450 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 ZNF626Q68DY1 528 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 ENTHD1Q8IYW4 607 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 Q8N2B8 174 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 C11orf44Q8N8P7 122 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 OR10H4Q8NGA5 316 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 OR8J1Q8NGP2 316 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 PP6455Q8WZ26 134 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 RFKQ969G6 155 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 SLAMF9Q96A28 289 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 BORCS8Q96FH0 119 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 SNX22Q96L94 193 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 ZNF714Q96N38 554 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 CIB1Q99828 191 aa15.14■□□□□ 0.01
CLN3-218ENST00000565688 IGKV1-27A0A075B6S5 117 aa15.13■□□□□ 0.01
CLN3-218ENST00000565688 hADV38S2A0JD32 116 aa15.13■□□□□ 0.01
CLN3-218ENST00000565688 F8VVB4 439 aa15.13■□□□□ 0.01
CLN3-218ENST00000565688 F8VWA3 439 aa15.13■□□□□ 0.01
CLN3-218ENST00000565688 UBCP0CG48 685 aaKnown RBP15.13■□□□□ 0.01
CLN3-218ENST00000565688 RASSF2P50749 326 aa15.13■□□□□ 0.01
CLN3-218ENST00000565688 CNN3Q15417 329 aaKnown RBP15.13■□□□□ 0.01
CLN3-218ENST00000565688 SSX2Q16385 188 aa15.13■□□□□ 0.01
CLN3-218ENST00000565688 SLC25A26Q70HW3 274 aa15.13■□□□□ 0.01
CLN3-218ENST00000565688 FAM220AQ7Z4H9 259 aa15.13■□□□□ 0.01
CLN3-218ENST00000565688 EGFL6Q8IUX8 553 aa15.13■□□□□ 0.01
CLN3-218ENST00000565688 ZNF702PQ9H963 129 aa15.13■□□□□ 0.01
CLN3-218ENST00000565688 MEGF11A6BM72 1044 aa15.12■□□□□ 0.01
CLN3-218ENST00000565688 DYNC1I1O14576 645 aa15.12■□□□□ 0.01
CLN3-218ENST00000565688 CYB5AP00167 134 aa15.12■□□□□ 0.01
CLN3-218ENST00000565688 PEX2P28328 305 aa15.12■□□□□ 0.01
CLN3-218ENST00000565688 RBP2P50120 134 aa15.12■□□□□ 0.01
CLN3-218ENST00000565688 DYNLT3P51808 116 aa15.12■□□□□ 0.01
CLN3-218ENST00000565688 OR12D2P58182 307 aa15.12■□□□□ 0.01
CLN3-218ENST00000565688 BNIP1Q12981 228 aa15.12■□□□□ 0.01
CLN3-218ENST00000565688 DYNC1I2Q13409 638 aaKnown RBP15.12■□□□□ 0.01
CLN3-218ENST00000565688 PLA1AQ53H76 456 aa15.12■□□□□ 0.01
CLN3-218ENST00000565688 AMIGO2Q86SJ2 522 aa15.12■□□□□ 0.01
CLN3-218ENST00000565688 DYNAPQ8N1N2 210 aa15.12■□□□□ 0.01
CLN3-218ENST00000565688 DNAAF1Q8NEP3 725 aa15.12■□□□□ 0.01
CLN3-218ENST00000565688 EMG1Q92979 244 aaKnown RBP15.12■□□□□ 0.01
CLN3-218ENST00000565688 GABARAPL3Q9BY60 117 aa15.12■□□□□ 0.01
CLN3-218ENST00000565688 LINC00312Q9Y6C7 94 aa15.12■□□□□ 0.01
CLN3-218ENST00000565688 LOC107986453A0A1B0GWG9 222 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 A6NDX4 124 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 H3BSH0 61 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 H3BUI4 141 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 FBXO24O75426 580 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 APOL3O95236 402 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 HAND1O96004 215 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 RAB13P51153 203 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 ATP1B3P54709 279 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 EMX1Q04741 257 aaPredicted RBP15.11■□□□□ 0.01
CLN3-218ENST00000565688 MINOS1Q5TGZ0 78 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 C1orf146Q5VVC0 180 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 PRSS35Q8N3Z0 413 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 OSBPL10Q9BXB5 764 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 PRSS22Q9GZN4 317 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 SERTAD4Q9NUC0 356 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 GLS2Q9UI32 602 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 GNG8Q9UK08 70 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 MINOS1-NBL1R4GNA1 71 aa15.11■□□□□ 0.01
CLN3-218ENST00000565688 TMEM82A0PJX8 343 aa15.1■□□□□ 0.01
CLN3-218ENST00000565688 G3V4G9 280 aa15.1■□□□□ 0.01
CLN3-218ENST00000565688 GABRR1P24046 479 aa15.1■□□□□ 0.01
CLN3-218ENST00000565688 POLR2IP36954 125 aaKnown RBP15.1■□□□□ 0.01
CLN3-218ENST00000565688 CDC42P60953 191 aa15.1■□□□□ 0.01
CLN3-218ENST00000565688 ISL1P61371 349 aa15.1■□□□□ 0.01
CLN3-218ENST00000565688 ACTA2P62736 377 aa15.1■□□□□ 0.01
CLN3-218ENST00000565688 ACTG2P63267 376 aa15.1■□□□□ 0.01
CLN3-218ENST00000565688 ACTC1P68032 377 aa15.1■□□□□ 0.01
CLN3-218ENST00000565688 ACTA1P68133 377 aa15.1■□□□□ 0.01
CLN3-218ENST00000565688 EDDM3AQ14507 147 aa15.1■□□□□ 0.01
CLN3-218ENST00000565688 GRK1Q15835 563 aa15.1■□□□□ 0.01
CLN3-218ENST00000565688 BEAN1Q3B7T3 259 aa15.1■□□□□ 0.01
CLN3-218ENST00000565688 KPRPQ5T749 579 aaPredicted RBP15.1■□□□□ 0.01
CLN3-218ENST00000565688 TMEM244Q5VVB8 128 aa15.1■□□□□ 0.01
CLN3-218ENST00000565688 CCBE1Q6UXH8 406 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms