RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 CD200R1LQ6Q8B3 271 aa13.89□□□□□ -0.19
RNF40-206ENST00000564260 BTNL3Q6UXE8 466 aa13.89□□□□□ -0.19
RNF40-206ENST00000564260 FAM58AQ8N1B3 248 aa13.89□□□□□ -0.19
RNF40-206ENST00000564260 OR52N4Q8NGI2 321 aa13.89□□□□□ -0.19
RNF40-206ENST00000564260 OR51A2Q8NGJ7 313 aa13.89□□□□□ -0.19
RNF40-206ENST00000564260 NR1H4Q96RI1 486 aaPredicted RBP13.89□□□□□ -0.19
RNF40-206ENST00000564260 GPER1Q99527 375 aa13.89□□□□□ -0.19
RNF40-206ENST00000564260 CTSZQ9UBR2 303 aa13.89□□□□□ -0.19
RNF40-206ENST00000564260 SF3B6Q9Y3B4 125 aaKnown RBP13.89□□□□□ -0.19
RNF40-206ENST00000564260 TLN2Q9Y4G6 2542 aa13.89□□□□□ -0.19
RNF40-206ENST00000564260 IGKV1D-17A0A075B6S4 117 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 LOC105371242A0A075B767 164 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 TRBV23-1A0A0A0MS06 115 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 CHRM2P08172 466 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 TMEM225BP0DP42 221 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 PRDX2P32119 198 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 PTGFRP43088 359 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 PSMD7P51665 324 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 PAX2Q02962 417 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 SCGB2A2Q13296 93 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 SYT6Q5T7P8 510 aaPredicted RBP13.88□□□□□ -0.19
RNF40-206ENST00000564260 CRIP3Q6Q6R5 217 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 LYPD2Q6UXB3 125 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 CEACAM19Q7Z692 300 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 CHST4Q8NCG5 386 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 C19orf18Q8NEA5 215 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 TBC1D15Q8TC07 691 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 RAB40AQ8WXH6 277 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 EMG1Q92979 244 aaKnown RBP13.88□□□□□ -0.19
RNF40-206ENST00000564260 SLAMF9Q96A28 289 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 DACT3Q96B18 629 aaPredicted RBP13.88□□□□□ -0.19
RNF40-206ENST00000564260 MRPS24Q96EL2 167 aaKnown RBP13.88□□□□□ -0.19
RNF40-206ENST00000564260 POM121Q96HA1 1249 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 GAFA1Q96PS6 74 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 S100A13Q99584 98 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 HMG20AQ9NP66 347 aa13.88□□□□□ -0.19
RNF40-206ENST00000564260 TEP1Q99973 2627 aaKnown RBP13.87□□□□□ -0.19
RNF40-206ENST00000564260 TRAV8-7A0A075B6U6 113 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 IGHV3OR15-7A0A075B7D8 119 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 IGHV2-70DA0A0C4DH43 119 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 KIR2DS1A0A191URI9 304 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 RFPL4AA6NLU0 287 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 RFPL4AL1F8VTS6 287 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 GABRPO00591 440 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 DVL1O14640 695 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 PIN1P1O15428 100 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 CD37P11049 281 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 SRMP19623 302 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 ZFP36P26651 326 aaKnown RBP13.87□□□□□ -0.19
RNF40-206ENST00000564260 LCN2P80188 198 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 HNRNPA0Q13151 305 aaKnown RBP13.87□□□□□ -0.19
RNF40-206ENST00000564260 NHLRC3Q5JS37 347 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 GLT8D1Q68CQ7 371 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 LINC00596Q86U02 117 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 TSPAN14Q8NG11 270 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 C8orf46Q8TAG6 207 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 PPP1R35Q8TAP8 253 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 TNFAIP8L1Q8WVP5 186 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 CCL13Q99616 98 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 SHARPINQ9H0F6 387 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 SNTG1Q9NSN8 517 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 INSIG2Q9Y5U4 225 aa13.87□□□□□ -0.19
RNF40-206ENST00000564260 YLPM1P49750 1951 aaKnown RBP13.87□□□□□ -0.19
RNF40-206ENST00000564260 TRDV1A0A1B0GX56 115 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 TRIM64CA6NLI5 447 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 H3BUI4 141 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 PLATP00750 562 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 UBBP0CG47 229 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 AMY2BP19961 511 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 PSMB9P28065 219 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 FGF12P61328 243 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 SEC61A1P61619 476 aaKnown RBP13.86□□□□□ -0.19
RNF40-206ENST00000564260 IL13RA2Q14627 380 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 SSX1Q16384 188 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 TMEM91Q6ZNR0 172 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 SATL1Q86VE3 508 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 LYPD6Q86Y78 171 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 OR51T1Q8NGJ9 327 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 OR5D13Q8NGL4 314 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 SPACA5Q96QH8 159 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 MRI1Q9BV20 369 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 METTL9Q9H1A3 318 aa13.86□□□□□ -0.19
RNF40-206ENST00000564260 SLC25A10Q9UBX3 287 aaPredicted RBP13.86□□□□□ -0.19
RNF40-206ENST00000564260 IGKV1-12A0A0C4DH73 117 aa13.85□□□□□ -0.19
RNF40-206ENST00000564260 SH2D1BO14796 132 aa13.85□□□□□ -0.19
RNF40-206ENST00000564260 PHF1O43189 567 aaPredicted RBP13.85□□□□□ -0.19
RNF40-206ENST00000564260 SPRY1O43609 319 aaPredicted RBP13.85□□□□□ -0.19
RNF40-206ENST00000564260 CRLF1O75462 422 aa13.85□□□□□ -0.19
RNF40-206ENST00000564260 INMTO95050 263 aa13.85□□□□□ -0.19
RNF40-206ENST00000564260 IGKV1D-12P01611 117 aa13.85□□□□□ -0.19
RNF40-206ENST00000564260 BCL3P20749 454 aa13.85□□□□□ -0.19
RNF40-206ENST00000564260 LMO1P25800 156 aa13.85□□□□□ -0.19
RNF40-206ENST00000564260 FGF9P31371 208 aaPredicted RBP13.85□□□□□ -0.19
RNF40-206ENST00000564260 RBMXP38159 391 aaKnown RBP13.85□□□□□ -0.19
RNF40-206ENST00000564260 GABRA2P47869 451 aa13.85□□□□□ -0.19
RNF40-206ENST00000564260 CAPZA1P52907 286 aa13.85□□□□□ -0.19
RNF40-206ENST00000564260 RPS25P62851 125 aaKnown RBP13.85□□□□□ -0.19
RNF40-206ENST00000564260 HOXA4Q00056 320 aaPredicted RBP13.85□□□□□ -0.19
RNF40-206ENST00000564260 PAX8Q06710 450 aa13.85□□□□□ -0.19
RNF40-206ENST00000564260 RSU1Q15404 277 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms