RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 OR5D13Q8NGL4 314 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 MRPS24Q96EL2 167 aaKnown RBP11.41□□□□□ -0.58
SHMT2-234ENST00000557703 S100A13Q99584 98 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 TMED9Q9BVK6 235 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 WDR13Q9H1Z4 485 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 NOX4Q9NPH5 578 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 HIF1ANQ9NWT6 349 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 TAS2R4Q9NYW5 299 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 CDC42EP3Q9UKI2 254 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 SF3B6Q9Y3B4 125 aaKnown RBP11.41□□□□□ -0.58
SHMT2-234ENST00000557703 ABCA2Q9BZC7 2435 aa11.41□□□□□ -0.58
SHMT2-234ENST00000557703 RGS9O75916 674 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-234ENST00000557703 ZNF205O95201 554 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 CHRM2P08172 466 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 TMEM225BP0DP42 221 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 PRDX2P32119 198 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 MTNR1BP49286 362 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 POU3F4P49335 361 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 SCGB2A2Q13296 93 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 DMRTC1Q5HYR2 192 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 GLT8D1Q68CQ7 371 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 ASPHD2Q6ICH7 369 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 BTNL3Q6UXE8 466 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 CHST4Q8NCG5 386 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 TSPAN14Q8NG11 270 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 OR52N4Q8NGI2 321 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 PPP1R35Q8TAP8 253 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 SMURF1Q9HCE7 757 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 HMG20AQ9NP66 347 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 SNTG1Q9NSN8 517 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 ZNF222Q9UK12 451 aa11.4□□□□□ -0.58
SHMT2-234ENST00000557703 SETD2Q9BYW2 2564 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-234ENST00000557703 IGKV1D-17A0A075B6S4 117 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 LOC105371242A0A075B767 164 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 TRBV23-1A0A0A0MS06 115 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 KIR2DS1A0A191URI9 304 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 TRDV1A0A1B0GX56 115 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 RFPL4AA6NLU0 287 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 RFPL4AL1F8VTS6 287 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 SH2D1BO14796 132 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 ENSAO43768 121 aaKnown RBP11.39□□□□□ -0.59
SHMT2-234ENST00000557703 INMTO95050 263 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 UBBP0CG47 229 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 FGF9P31371 208 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-234ENST00000557703 CAPZA1P52907 286 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 TIMM50Q3ZCQ8 353 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 NHLRC3Q5JS37 347 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 DCAF12L2Q5VW00 463 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 LINC00596Q86U02 117 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 OR51A2Q8NGJ7 313 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 OR51T1Q8NGJ9 327 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 OR13C5Q8NGS8 318 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 C8orf46Q8TAG6 207 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 RAB40AQ8WXH6 277 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 SLAMF9Q96A28 289 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 SMR3AQ99954 134 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 METTL9Q9H1A3 318 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 YAE1D1Q9NRH1 226 aa11.39□□□□□ -0.59
SHMT2-234ENST00000557703 TRAV8-7A0A075B6U6 113 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 TRAV1-2A0A0B4J238 106 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 A0A1W2PPH5 198 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 TRIM64CA6NLI5 447 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 KIAA1324LA8MWY0 1029 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-234ENST00000557703 DVL1O14640 695 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 PIN1P1O15428 100 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 CSTBP04080 98 aaKnown RBP11.38□□□□□ -0.59
SHMT2-234ENST00000557703 ZNF16P17020 682 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-234ENST00000557703 LMO1P25800 156 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 ZFP36P26651 326 aaKnown RBP11.38□□□□□ -0.59
SHMT2-234ENST00000557703 PSMB9P28065 219 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 GABRA2P47869 451 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 FGF12P61328 243 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 RSU1Q15404 277 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 CRIP3Q6Q6R5 217 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 LYPD2Q6UXB3 125 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 TMEM91Q6ZNR0 172 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 GDPGP1Q6ZNW5 385 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 C1orf122Q6ZSJ8 110 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 SATL1Q86VE3 508 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 TNFAIP8L1Q8WVP5 186 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 EMG1Q92979 244 aaKnown RBP11.38□□□□□ -0.59
SHMT2-234ENST00000557703 DACT3Q96B18 629 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-234ENST00000557703 SNX22Q96L94 193 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 CCL13Q99616 98 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 SHARPINQ9H0F6 387 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 GSX1Q9H4S2 264 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-234ENST00000557703 SLC25A10Q9UBX3 287 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-234ENST00000557703 GSTK1Q9Y2Q3 226 aa11.38□□□□□ -0.59
SHMT2-234ENST00000557703 FN1P02751 2386 aaKnown RBP11.37□□□□□ -0.59
SHMT2-234ENST00000557703 IGHV3OR15-7A0A075B7D8 119 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 IGHV2-70DA0A0C4DH43 119 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 FUOMA2VDF0 154 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 K7N7A8 449 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 GABRPO00591 440 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 PDCD5O14737 125 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 SPRY1O43609 319 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-234ENST00000557703 TMEM127O75204 238 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 JUNBP17275 347 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-234ENST00000557703 BPIFB3P59826 476 aa11.37□□□□□ -0.59
SHMT2-234ENST00000557703 LCN2P80188 198 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms