RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 C5orf46Q6UWT4 87 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 NPSR1Q6W5P4 371 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 ZNF704Q6ZNC4 412 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-246ENST00000557030 PQLC2Q6ZP29 291 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 DPY19L4Q7Z388 723 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 TRAPPC6BQ86SZ2 158 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 CATSPERDQ86XM0 798 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 KDM8Q8N371 416 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 COMMD1Q8N668 190 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 BCORP1Q8N888 145 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 C15orf54Q8N8G6 183 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 POC1AQ8NBT0 407 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 OR13C3Q8NGS6 347 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 OR8K3Q8NH51 312 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 OR10G6Q8NH81 332 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 ZPLD1Q8TCW7 415 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 SFT2D1Q8WV19 159 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 METTL21AQ8WXB1 218 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 AQP3Q92482 292 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 DCUN1D4Q92564 292 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 TSACCQ96A04 125 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-246ENST00000557030 RRNAD1Q96FB5 475 aaKnown RBP4.06□□□□□ -1.76
ATXN3-246ENST00000557030 SLC25A44Q96H78 314 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-246ENST00000557030 ZNF75AQ96N20 296 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 DGAT2Q96PD7 388 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 TSPAN32Q96QS1 320 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 LPAR4Q99677 370 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 SLC6A7Q99884 636 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 ZNF251Q9BRH9 671 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 NUDT9Q9BW91 350 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 GPR174Q9BXC1 333 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 WDR13Q9H1Z4 485 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 SYT4Q9H2B2 425 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 RNF122Q9H9V4 155 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 ELOVL3Q9HB03 270 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 RAB18Q9NP72 206 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 FANCFQ9NPI8 374 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 PRMT8Q9NR22 394 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-246ENST00000557030 SMCO4Q9NRQ5 59 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 UBQLN4Q9NRR5 601 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 UQCC1Q9NVA1 299 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 MYEF2Q9P2K5 600 aaKnown RBP4.06□□□□□ -1.76
ATXN3-246ENST00000557030 CTSFQ9UBX1 484 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 VSIG4Q9Y279 399 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 FARSAQ9Y285 508 aaKnown RBP4.06□□□□□ -1.76
ATXN3-246ENST00000557030 CSAG2Q9Y5P2 127 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 KPTNQ9Y664 436 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 DCHS1Q96JQ0 3298 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 MYO9BQ13459 2157 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 NUMA1Q14980 2115 aa4.06□□□□□ -1.76
ATXN3-246ENST00000557030 A0A0G2JNG1 304 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 PRSS37A4D1T9 235 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 A6NIZ1 184 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 CEACAM18A8MTB9 384 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 EEF1E1-BLOC1S5C9J1V9 151 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 MFNGO00587 321 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 CCSO14618 274 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 ZNF264O43296 627 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 ALOX12BO75342 701 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 SNRNP200O75643 2136 aaKnown RBP4.05□□□□□ -1.76
ATXN3-246ENST00000557030 BGLAPP02818 100 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 PGCP20142 388 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 CXCR1P25024 350 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 PTAFRP25105 342 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 CAMPP49913 170 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 CCR4P51679 360 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 HSD17B7P56937 341 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 SEC61BP60468 96 aaKnown RBP4.05□□□□□ -1.76
ATXN3-246ENST00000557030 RAP1BP61224 184 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 RPL27P61353 136 aaKnown RBP4.05□□□□□ -1.76
ATXN3-246ENST00000557030 RAP1AP62834 184 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 BTG2P78543 158 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 POU3F1Q03052 451 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-246ENST00000557030 FUT7Q11130 342 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 PDZK1IP1Q13113 114 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 EIF3IQ13347 325 aaKnown RBP4.05□□□□□ -1.76
ATXN3-246ENST00000557030 PPP1R1AQ13522 171 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 FAM53BQ14153 422 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 SMCO1Q147U7 214 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 KIR2DS5Q14953 304 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 ATXN7L3Q14CW9 347 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-246ENST00000557030 ADIPOQQ15848 244 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 SGCBQ16585 318 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 LRRC37A5PQ49AS3 106 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 TMEM128Q5BJH2 165 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-246ENST00000557030 SLC22A24Q8N4F4 322 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 ZNF561Q8N587 486 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 ARRDC1Q8N5I2 433 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 OR5T3Q8NGG3 340 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 OR13C8Q8NGS7 320 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 OR10AC1Q8NH08 325 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 OR6S1Q8NH40 331 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 OR52N5Q8NH56 324 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 ZNF563Q8TA94 476 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 PAQR8Q8TEZ7 354 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 FAM3CQ92520 227 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 TCEAL3Q969E4 200 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 C8orf44Q96CB5 159 aa4.05□□□□□ -1.76
ATXN3-246ENST00000557030 SEC22AQ96IW7 307 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms