RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 KPTNQ9Y664 436 aa8.51□□□□□ -1.05
SHMT2-224ENST00000556737 IGHV1-69DA0A0B4J2H0 117 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 TRBV2A0A0J9YWF9 115 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 LOC100506127A0A0U1RQW1 187 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 LOC107986453A0A1B0GWG9 222 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 A6NIN4 97 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 OR2AT4A6NND4 320 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 H3BSH0 61 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 J3QT63 122 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 SYNGR1O43759 233 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 SULT1C4O75897 302 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 LALBAP00709 142 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 NRASP01111 189 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 IGHV1-69P01742 117 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 PGA5P0DJD9 388 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 HKR1P10072 659 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 PSG2P11465 335 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 GLRA1P23415 457 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 MPZP25189 248 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 CFPP27918 469 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 LSM3P62310 102 aaKnown RBP8.5□□□□□ -1.05
SHMT2-224ENST00000556737 ARF6P62330 175 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 IL13RA1P78552 427 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 MRPL28Q13084 256 aaKnown RBP8.5□□□□□ -1.05
SHMT2-224ENST00000556737 PDCD1Q15116 288 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 ODF4Q2M2E3 257 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 AWAT1Q58HT5 328 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 METTL11BQ5VVY1 283 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 RPL22L1Q6P5R6 122 aaKnown RBP8.5□□□□□ -1.05
SHMT2-224ENST00000556737 RBMS3Q6XE24 437 aaKnown RBP8.5□□□□□ -1.05
SHMT2-224ENST00000556737 Q8N7P7 452 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 TMEM203Q969S6 136 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 PELI1Q96FA3 418 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 ZNF488Q96MN9 340 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 ZNF649Q9BS31 505 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 FUNDC2Q9BWH2 189 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 FAM192AQ9GZU8 254 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 ELL3Q9HB65 397 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-224ENST00000556737 HES4Q9HCC6 221 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 ISYNA1Q9NPH2 558 aa8.5□□□□□ -1.05
SHMT2-224ENST00000556737 TRRAPQ9Y4A5 3859 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 ANKRD61A6NGH8 418 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 E9PI62 339 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 HAX1O00165 279 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 GPR37O15354 613 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 HOXA3O43365 443 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-224ENST00000556737 NDUFB3O43676 98 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 AIREO43918 545 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 NOS1APO75052 506 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-224ENST00000556737 ACAA1P09110 424 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-224ENST00000556737 CPEP16870 476 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 GADD45AP24522 165 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 PSMA1P25786 263 aaKnown RBP8.49□□□□□ -1.05
SHMT2-224ENST00000556737 HAAOP46952 286 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 DLX1P56177 255 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 CAV3P56539 151 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 BPIFB3P59826 476 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 RPS25P62851 125 aaKnown RBP8.49□□□□□ -1.05
SHMT2-224ENST00000556737 BDH1Q02338 343 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 DOC2BQ14184 412 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 TIMM50Q3ZCQ8 353 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 LRRC10Q5BKY1 277 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 ACP7Q6ZNF0 438 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 VMO1Q7Z5L0 202 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 CALHM1Q8IU99 346 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 PIP4P2Q8N4L2 257 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 CD177Q8N6Q3 437 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 ZNF676Q8N7Q3 588 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 HAVCR2Q8TDQ0 301 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 TAF15Q92804 592 aaKnown RBP eCLIP8.49□□□□□ -1.05
SHMT2-224ENST00000556737 GCDHQ92947 438 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-224ENST00000556737 TNFRSF14Q92956 283 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 LHX4Q969G2 390 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 YIPF6Q96EC8 236 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 SDSLQ96GA7 329 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 DMRTB1Q96MA1 342 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 NRIP2Q9BQI9 281 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 CHCHD6Q9BRQ6 235 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 CHST5Q9GZS9 411 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 NAA50Q9GZZ1 169 aaKnown RBP8.49□□□□□ -1.05
SHMT2-224ENST00000556737 COMMD4Q9H0A8 199 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 CNTD2Q9H8S5 307 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 PLEKHA1Q9HB21 404 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 ONECUT1Q9UBC0 465 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 SLC25A10Q9UBX3 287 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-224ENST00000556737 RSL24D1Q9UHA3 163 aaKnown RBP8.49□□□□□ -1.05
SHMT2-224ENST00000556737 SSR3Q9UNL2 185 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 MAB21L2Q9Y586 359 aa8.49□□□□□ -1.05
SHMT2-224ENST00000556737 NBEAL1Q6ZS30 2694 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 IGKV1-27A0A075B6S5 117 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 A0A1B0GVI7 797 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 A6NHS1 94 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 MELTFP08582 738 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 UBCP0CG48 685 aaKnown RBP8.48□□□□□ -1.05
SHMT2-224ENST00000556737 TGFBR2P37173 567 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 CEBPDP49716 269 aaPredicted RBP8.48□□□□□ -1.05
SHMT2-224ENST00000556737 NANOS3P60323 173 aaKnown RBP8.48□□□□□ -1.05
SHMT2-224ENST00000556737 ERVK11-1P61568 191 aa8.48□□□□□ -1.05
SHMT2-224ENST00000556737 PRB3Q04118 309 aaPredicted RBP8.48□□□□□ -1.05
SHMT2-224ENST00000556737 ACSM1Q08AH1 577 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms