RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 APCP25054 2843 aa5.33□□□□□ -1.56
SCFD1-212ENST00000554486 IGKV1-9A0A0C4DH69 117 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 LOC100506127A0A0U1RQW1 187 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 ZNF816-ZNF321PA0A0X1KG74 233 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 A0A1B0GWJ7 208 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 CGB1A6NKQ9 187 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 HS3ST1O14792 307 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 AIREO43918 545 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 TIMM8AO60220 97 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-212ENST00000554486 GMDSO60547 372 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 GABARAPO95166 117 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 SERPINA3P01011 423 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 CST4P01036 141 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 RAF1P04049 648 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 SELEP16581 610 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 IGFBP3P17936 291 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-212ENST00000554486 FGF9P31371 208 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-212ENST00000554486 TGFBR1P36897 503 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 DDOSTP39656 456 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 EVX1P49640 407 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 MMP15P51511 669 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 KLF3P57682 345 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-212ENST00000554486 NCS1P62166 190 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 LSM3P62310 102 aaKnown RBP5.32□□□□□ -1.56
SCFD1-212ENST00000554486 RIPPLY1Q0D2K3 151 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 UBE2V2Q15819 145 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 CTF1Q16619 201 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 C4orf46Q504U0 113 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 DMRTC1Q5HYR2 192 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 CLVS2Q5SYC1 327 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 HIST2H2BCQ6DN03 193 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 GDPGP1Q6ZNW5 385 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 UTS2BQ765I0 119 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 LRRTM1Q86UE6 522 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 CLVS1Q8IUQ0 354 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-212ENST00000554486 PARP16Q8N5Y8 322 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 CSNK2A3Q8NEV1 391 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 OR8G5Q8NG78 346 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 OR51A2Q8NGJ7 313 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 PHYHIPQ92561 330 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 PIGTQ969N2 578 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 TMEM106AQ96A25 262 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 DHRS9Q9BPW9 319 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 SLC30A2Q9BRI3 323 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 PAPOLGQ9BWT3 736 aaKnown RBP5.32□□□□□ -1.56
SCFD1-212ENST00000554486 TM2D2Q9BX73 214 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 EXOSC4Q9NPD3 245 aaKnown RBP5.32□□□□□ -1.56
SCFD1-212ENST00000554486 TAS2R4Q9NYW5 299 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 TAAR3PQ9P1P4 343 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 PLEKHB1Q9UF11 243 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-212ENST00000554486 HECTD1Q9ULT8 2610 aa5.32□□□□□ -1.56
SCFD1-212ENST00000554486 ZSCAN5BA6NJL1 495 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 ANKRD30BLA7E2S9 258 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 ZNF850A8MQ14 1090 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 H0YL77 283 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 MLNRO43193 412 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 NRASP01111 189 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 CD8AP01732 235 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 CD2P06729 351 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 SOD3P08294 240 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 DANCRP0C864 163 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 ADRA2CP18825 462 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 ATF1P18846 271 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 CA6P23280 308 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 MAPK3P27361 379 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-212ENST00000554486 CALRP27797 417 aaKnown RBP5.31□□□□□ -1.56
SCFD1-212ENST00000554486 ALDH3B1P43353 468 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 TMBIM6P55061 237 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 SELENOVP59797 346 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 VBP1P61758 197 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 TLE4Q04727 773 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 PRDX4Q13162 271 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 EFNB3Q15768 340 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 TIMM50Q3ZCQ8 353 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 HSD17B12Q53GQ0 312 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 CEP78Q5JTW2 689 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 DGAT2L7PQ6IED9 249 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 C11orf71Q6IPW1 123 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 PAMR1Q6UXH9 720 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 MOB3CQ70IA8 216 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 RNF144BQ7Z419 303 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 SERPINA12Q8IW75 414 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 HPSE2Q8WWQ2 592 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 PP6455Q8WZ26 134 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 PIGCQ92535 297 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 THRSPQ92748 146 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 ISOC1Q96CN7 298 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 GFI1Q99684 422 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 CHST5Q9GZS9 411 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 PLK3Q9H4B4 646 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 PLEKHF2Q9H8W4 249 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 UBTD1Q9HAC8 227 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 PLEKHA1Q9HB21 404 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 GPR173Q9NS66 373 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 TMEM100Q9NV29 134 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 MRPL15Q9P015 296 aaKnown RBP5.31□□□□□ -1.56
SCFD1-212ENST00000554486 GSTK1Q9Y2Q3 226 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 MPC1Q9Y5U8 109 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 POLQO75417 2590 aa5.31□□□□□ -1.56
SCFD1-212ENST00000554486 ARID1AO14497 2285 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms