RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 ARF6P62330 175 aa19.53■□□□□ 0.72
TDP1-205ENST00000553527 USP43Q70EL4 1123 aa19.53■□□□□ 0.72
TDP1-205ENST00000553527 ZNF573Q86YE8 665 aa19.53■□□□□ 0.72
TDP1-205ENST00000553527 H1FXQ92522 213 aaKnown RBP19.53■□□□□ 0.72
TDP1-205ENST00000553527 TMED9Q9BVK6 235 aa19.53■□□□□ 0.72
TDP1-205ENST00000553527 VCX3AQ9NNX9 186 aa19.53■□□□□ 0.72
TDP1-205ENST00000553527 TRBV5-5A0A0J9YX44 114 aa19.52■□□□□ 0.72
TDP1-205ENST00000553527 ZNF879B4DU55 563 aa19.52■□□□□ 0.72
TDP1-205ENST00000553527 RPS11P62280 158 aaKnown RBP eCLIP19.52■□□□□ 0.72
TDP1-205ENST00000553527 CNN3Q15417 329 aaKnown RBP19.52■□□□□ 0.72
TDP1-205ENST00000553527 NEDD8Q15843 81 aa19.52■□□□□ 0.72
TDP1-205ENST00000553527 Q499Y3 187 aa19.52■□□□□ 0.72
TDP1-205ENST00000553527 LRRC10Q5BKY1 277 aa19.52■□□□□ 0.72
TDP1-205ENST00000553527 BRD3OSQ6XYD6 125 aa19.52■□□□□ 0.72
TDP1-205ENST00000553527 UTS2BQ765I0 119 aa19.52■□□□□ 0.72
TDP1-205ENST00000553527 ANGPTL5Q86XS5 388 aa19.52■□□□□ 0.72
TDP1-205ENST00000553527 ANGPTL6Q8NI99 470 aa19.52■□□□□ 0.72
TDP1-205ENST00000553527 TMEM106AQ96A25 262 aa19.52■□□□□ 0.72
TDP1-205ENST00000553527 DUX5Q96PT3 197 aa19.52■□□□□ 0.72
TDP1-205ENST00000553527 ESM1Q9NQ30 184 aa19.52■□□□□ 0.72
TDP1-205ENST00000553527 SLC7A11Q9UPY5 501 aa19.52■□□□□ 0.72
TDP1-205ENST00000553527 PQLC2LA1A4F0 135 aa19.51■□□□□ 0.71
TDP1-205ENST00000553527 TRIM77I1YAP6 450 aa19.51■□□□□ 0.71
TDP1-205ENST00000553527 ECDO95905 644 aaPredicted RBP19.51■□□□□ 0.71
TDP1-205ENST00000553527 OCMP0CE72 109 aaPredicted RBP19.51■□□□□ 0.71
TDP1-205ENST00000553527 UBE2V2Q15819 145 aa19.51■□□□□ 0.71
TDP1-205ENST00000553527 ATPAF1Q5TC12 328 aaPredicted RBP19.51■□□□□ 0.71
TDP1-205ENST00000553527 METTL11BQ5VVY1 283 aa19.51■□□□□ 0.71
TDP1-205ENST00000553527 SERPINA12Q8IW75 414 aa19.51■□□□□ 0.71
TDP1-205ENST00000553527 MS4A15Q8N5U1 240 aa19.51■□□□□ 0.71
TDP1-205ENST00000553527 PARP16Q8N5Y8 322 aa19.51■□□□□ 0.71
TDP1-205ENST00000553527 THRSPQ92748 146 aa19.51■□□□□ 0.71
TDP1-205ENST00000553527 WDFY2Q96P53 400 aa19.51■□□□□ 0.71
TDP1-205ENST00000553527 GAFA1Q96PS6 74 aa19.51■□□□□ 0.71
TDP1-205ENST00000553527 OR14A2Q96R54 314 aa19.51■□□□□ 0.71
TDP1-205ENST00000553527 CNTD2Q9H8S5 307 aa19.51■□□□□ 0.71
TDP1-205ENST00000553527 RPUSD1Q9UJJ7 312 aaKnown RBP19.51■□□□□ 0.71
TDP1-205ENST00000553527 J3QT63 122 aa19.5■□□□□ 0.71
TDP1-205ENST00000553527 INMTO95050 263 aa19.5■□□□□ 0.71
TDP1-205ENST00000553527 PSG2P11465 335 aa19.5■□□□□ 0.71
TDP1-205ENST00000553527 NDUFB7P17568 137 aa19.5■□□□□ 0.71
TDP1-205ENST00000553527 IL13RA1P78552 427 aa19.5■□□□□ 0.71
TDP1-205ENST00000553527 TRAM1Q15629 374 aa19.5■□□□□ 0.71
TDP1-205ENST00000553527 DGUOKQ16854 277 aa19.5■□□□□ 0.71
TDP1-205ENST00000553527 ZNF788Q6ZQV5 615 aa19.5■□□□□ 0.71
TDP1-205ENST00000553527 OR5D14Q8NGL3 314 aa19.5■□□□□ 0.71
TDP1-205ENST00000553527 OR13C9Q8NGT0 318 aa19.5■□□□□ 0.71
TDP1-205ENST00000553527 MED30Q96HR3 178 aa19.5■□□□□ 0.71
TDP1-205ENST00000553527 ZNF48Q96MX3 618 aaPredicted RBP19.5■□□□□ 0.71
TDP1-205ENST00000553527 ZCCHC4Q9H5U6 513 aa19.5■□□□□ 0.71
TDP1-205ENST00000553527 ONECUT1Q9UBC0 465 aa19.5■□□□□ 0.71
TDP1-205ENST00000553527 SLC25A10Q9UBX3 287 aaPredicted RBP19.5■□□□□ 0.71
TDP1-205ENST00000553527 IGKV1D-17A0A075B6S4 117 aa19.49■□□□□ 0.71
TDP1-205ENST00000553527 PLATP00750 562 aa19.49■□□□□ 0.71
TDP1-205ENST00000553527 ACAA1P09110 424 aaPredicted RBP19.49■□□□□ 0.71
TDP1-205ENST00000553527 ATF1P18846 271 aa19.49■□□□□ 0.71
TDP1-205ENST00000553527 PSMA1P25786 263 aaKnown RBP19.49■□□□□ 0.71
TDP1-205ENST00000553527 MAPK3P27361 379 aaPredicted RBP19.49■□□□□ 0.71
TDP1-205ENST00000553527 RPS25P62851 125 aaKnown RBP19.49■□□□□ 0.71
TDP1-205ENST00000553527 GPR157Q5UAW9 335 aa19.49■□□□□ 0.71
TDP1-205ENST00000553527 CALHM1Q8IU99 346 aa19.49■□□□□ 0.71
TDP1-205ENST00000553527 PDZD9Q8IXQ8 264 aa19.49■□□□□ 0.71
TDP1-205ENST00000553527 ZDHHC22Q8N966 263 aa19.49■□□□□ 0.71
TDP1-205ENST00000553527 POC1AQ8NBT0 407 aa19.49■□□□□ 0.71
TDP1-205ENST00000553527 ZNRF1Q8ND25 227 aa19.49■□□□□ 0.71
TDP1-205ENST00000553527 TMEM203Q969S6 136 aa19.49■□□□□ 0.71
TDP1-205ENST00000553527 TBX15Q96SF7 602 aa19.49■□□□□ 0.71
TDP1-205ENST00000553527 DNTTIP1Q9H147 329 aa19.49■□□□□ 0.71
TDP1-205ENST00000553527 TAS2R4Q9NYW5 299 aa19.49■□□□□ 0.71
TDP1-205ENST00000553527 RFPL4AA6NLU0 287 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 RFPL4AL1F8VTS6 287 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 CCRL2O00421 344 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 NXPH2O95156 264 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 AZGP1P25311 298 aaKnown RBP19.48■□□□□ 0.71
TDP1-205ENST00000553527 GABRA5P31644 462 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 ACTG1P63261 375 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 BAMBIQ13145 260 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 SSX1Q16384 188 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 RUSC1-AS1Q66K80 236 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 ACP7Q6ZNF0 438 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 TMEM185AQ8NFB2 350 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 LHX4Q969G2 390 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 SPSB1Q96BD6 273 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 BORCS8Q96FH0 119 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 DERL3Q96Q80 235 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 ELL3Q9HB65 397 aaPredicted RBP19.48■□□□□ 0.71
TDP1-205ENST00000553527 NEK6Q9HC98 313 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 NDUFB11Q9NX14 153 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 RASL12Q9NYN1 266 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 CKLFQ9UBR5 152 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 POLDIP2Q9Y2S7 368 aa19.48■□□□□ 0.71
TDP1-205ENST00000553527 MDFIC2A0A1B0GVS7 189 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 SIGLEC5O15389 551 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 SULT1B1O43704 296 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 PGA5P0DJD9 388 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 MMP9P14780 707 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 PRKACBP22694 351 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 FUT6P51993 359 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 CAPZA1P52907 286 aa19.47■□□□□ 0.71
TDP1-205ENST00000553527 PPP3R1P63098 170 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms