RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 SERPINA3P01011 423 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 TK1P04183 234 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 PIPP12273 146 aaPredicted RBP12.97□□□□□ -0.33
CDK4-215ENST00000553237 CCL3L1P16619 93 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 ZNF19P17023 458 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 FUT6P51993 359 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 RPL15P61313 204 aaKnown RBP12.97□□□□□ -0.33
CDK4-215ENST00000553237 ERVK11-1P61568 191 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 COL10A1Q03692 680 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 ACSM1Q08AH1 577 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 SMN1Q16637 294 aaKnown RBP12.97□□□□□ -0.33
CDK4-215ENST00000553237 ZNF691Q5VV52 312 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 GDPGP1Q6ZNW5 385 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 LHFPL3Q86UP9 236 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 DHRSXQ8N5I4 330 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 OR2G2Q8NGZ5 317 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 LINC01006Q8NI28 216 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 SLAMF9Q96A28 289 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 MTCH1Q9NZJ7 389 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 NKX1-2Q9UD57 310 aaPredicted RBP12.97□□□□□ -0.33
CDK4-215ENST00000553237 RNF114Q9Y508 228 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 TRRAPQ9Y4A5 3859 aa12.97□□□□□ -0.33
CDK4-215ENST00000553237 MEX3AA1L020 520 aaKnown RBP12.96□□□□□ -0.33
CDK4-215ENST00000553237 GATBO75879 557 aaKnown RBP12.96□□□□□ -0.33
CDK4-215ENST00000553237 UBCP0CG48 685 aaKnown RBP12.96□□□□□ -0.33
CDK4-215ENST00000553237 PAX6P26367 422 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 KRTAP10-3P60369 221 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 ADARB1P78563 741 aaKnown RBP12.96□□□□□ -0.33
CDK4-215ENST00000553237 RAB40BQ12829 278 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 GALEQ14376 348 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 ZNF273Q14593 569 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 DHRS7BQ6IAN0 325 aaPredicted RBP12.96□□□□□ -0.33
CDK4-215ENST00000553237 BRICD5Q6PL45 260 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 SLC25A26Q70HW3 274 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 C11orf42Q8N5U0 333 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 ASCC1Q8N9N2 400 aaKnown RBP12.96□□□□□ -0.33
CDK4-215ENST00000553237 CCDC54Q8NEL0 328 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 OR52I1Q8NGK6 324 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 CNIH3Q8TBE1 160 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 FGGYQ96C11 551 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 ADAT3Q96EY9 351 aaPredicted RBP12.96□□□□□ -0.33
CDK4-215ENST00000553237 BORCS8Q96FH0 119 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 CEP19Q96LK0 163 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 ALG8Q9BVK2 526 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 CHST5Q9GZS9 411 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 MRPS18AQ9NVS2 196 aaKnown RBP12.96□□□□□ -0.33
CDK4-215ENST00000553237 FRRS1LQ9P0K9 344 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 VPREB3Q9UKI3 123 aa12.96□□□□□ -0.33
CDK4-215ENST00000553237 PKD1L1Q8TDX9 2849 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 A0A1W2PPH5 198 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 K7N7A8 449 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 IGHA1P01876 353 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 COX7A1P24310 79 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 NANOS3P60323 173 aaKnown RBP12.95□□□□□ -0.34
CDK4-215ENST00000553237 ACTA2P62736 377 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 ACTG2P63267 376 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 SLC34A1Q06495 639 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 KLHL22Q53GT1 634 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 TMEM244Q5VVB8 128 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 TREML4Q6UXN2 200 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 Q6ZSV7 163 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 EGFL6Q8IUX8 553 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 ZSCAN4Q8NAM6 433 aaPredicted RBP12.95□□□□□ -0.34
CDK4-215ENST00000553237 BEND2Q8NDZ0 799 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 SETD9Q8NE22 299 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 MRPL48Q96GC5 212 aaKnown RBP12.95□□□□□ -0.34
CDK4-215ENST00000553237 C4orf36Q96KX1 117 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 HEXA-AS1Q9H8Q6 139 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 INPP5EQ9NRR6 644 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 ERVK13-1Q9NX77 482 aa12.95□□□□□ -0.34
CDK4-215ENST00000553237 IGKV1-9A0A0C4DH69 117 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 H3BUX3 64 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 CHRM2P08172 466 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 HTR1AP08908 422 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 CALCBP10092 127 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 CAPGP40121 348 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 POU3F4P49335 361 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 BMXP51813 675 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 ATP1B3P54709 279 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 EDDM3BP56851 147 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 CNN3Q15417 329 aaKnown RBP12.94□□□□□ -0.34
CDK4-215ENST00000553237 LY6EQ16553 131 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 MIDNQ504T8 468 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 FDX2Q6P4F2 183 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 ZNF782Q6ZMW2 699 aaPredicted RBP12.94□□□□□ -0.34
CDK4-215ENST00000553237 OR10AC1Q8NH08 325 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 PP6455Q8WZ26 134 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 EMG1Q92979 244 aaKnown RBP12.94□□□□□ -0.34
CDK4-215ENST00000553237 C10orf35Q96D05 121 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 PELI1Q96FA3 418 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 AJUBAQ96IF1 538 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 MYCBPQ99417 103 aaPredicted RBP12.94□□□□□ -0.34
CDK4-215ENST00000553237 SSX3Q99909 188 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 ZNF649Q9BS31 505 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 FAM234AQ9H0X4 552 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 PPA2Q9H2U2 334 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 VCXQ9H320 206 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 ISG20L2Q9H9L3 353 aaKnown RBP12.94□□□□□ -0.34
CDK4-215ENST00000553237 IL36RNQ9UBH0 155 aa12.94□□□□□ -0.34
CDK4-215ENST00000553237 hCG_1809904A0A1W2PP81 198 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms