RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 EME1Q96AY2 570 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 FOXRED1Q96CU9 486 aaPredicted RBP8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 MALSU1Q96EH3 234 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 SNX22Q96L94 193 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 NPFFR1Q9GZQ6 430 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 GNG8Q9UK08 70 aa8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 TBL2Q9Y4P3 447 aaKnown RBP8.86□□□□□ -0.99
VTI1BP3-201ENST00000550220 FUOMA2VDF0 154 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 A6NIN4 97 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 ISG15P05161 165 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 OCM2P0CE71 109 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 OCMP0CE72 109 aaPredicted RBP8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 ZNF728P0DKX0 622 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 PEX2P28328 305 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 POLR2IP36954 125 aaKnown RBP8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 DLX1P56177 255 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 SNRPGP62308 76 aaKnown RBP8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 DEFA6Q01524 100 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 COL10A1Q03692 680 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 PRB3Q04118 309 aaPredicted RBP8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 ODF4Q2M2E3 257 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 FDX2Q6P4F2 183 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 ZBTB49Q6ZSB9 765 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 LHFPL2Q6ZUX7 228 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 SLC25A26Q70HW3 274 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 UTS2BQ765I0 119 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 SSX6Q7RTT6 188 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 OR8H2Q8N162 312 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 OR4M1Q8NGD0 313 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 OR2T6Q8NHC8 308 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 SPSB1Q96BD6 273 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 HRASLS5Q96KN8 279 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 RHOFQ9HBH0 211 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 ABCB10Q9NRK6 738 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 MTCH1Q9NZJ7 389 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 PITPNC1Q9UKF7 332 aa8.85□□□□□ -0.99
VTI1BP3-201ENST00000550220 WNK1Q9H4A3 2382 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 LOC107986453A0A1B0GWG9 222 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 DAPL1A0PJW8 107 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 FAM90A8PA6NJQ4 464 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 SLC16A6O15403 523 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 MPZL2O60487 215 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 ZNF737O75373 536 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 ZNF20P17024 532 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 CCR9P51686 369 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 MTCP1P56278 107 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 EDDM3BP56851 147 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 ISL1P61371 349 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 ACTA2P62736 377 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 ACTG2P63267 376 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 MRPL28Q13084 256 aaKnown RBP8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 ZNF273Q14593 569 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 HERPUD1Q15011 391 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 PDLIM3Q53GG5 364 aaPredicted RBP8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 SPIN3Q5JUX0 258 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 PRSS35Q8N3Z0 413 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 OR11H6Q8NGC7 330 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 OR2G2Q8NGZ5 317 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 HAVCR2Q8TDQ0 301 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 AJUBAQ96IF1 538 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 Q96MT0 163 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 PCDHGB5Q9Y5G0 923 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 PKD1L1Q8TDX9 2849 aa8.84□□□□□ -0.99
VTI1BP3-201ENST00000550220 TRBV2A0A0J9YWF9 115 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 SAC3D1A6NKF1 404 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 KCNAB3O43448 404 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 HAND1O96004 215 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 ARG1P05089 322 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 ALPLP05186 524 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 HTR1AP08908 422 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 CSF1P09603 554 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 IGHV1-8P0DP01 117 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 PIPP12273 146 aaPredicted RBP8.83□□□□□ -1
VTI1BP3-201ENST00000550220 CCL3L1P16619 93 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 ATF1P18846 271 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 COX7A1P24310 79 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 ERP29P30040 261 aaKnown RBP8.83□□□□□ -1
VTI1BP3-201ENST00000550220 CEBPDP49716 269 aaPredicted RBP8.83□□□□□ -1
VTI1BP3-201ENST00000550220 ALDH3A2P51648 485 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 DYNLT3P51808 116 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 DLX6P56179 175 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 OR12D2P58182 307 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 KRTAP10-3P60369 221 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 ZNF85Q03923 595 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 ZNF146Q15072 292 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 LY6EQ16553 131 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 TP53I3Q53FA7 332 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 MINOS1Q5TGZ0 78 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 FAM58AQ8N1B3 248 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 ACBD7Q8N6N7 88 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 RPS4Y2Q8TD47 263 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 C17orf50Q8WW18 174 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 EMG1Q92979 244 aaKnown RBP8.83□□□□□ -1
VTI1BP3-201ENST00000550220 SLAMF9Q96A28 289 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 RNFT2Q96EX2 444 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 ZNF714Q96N38 554 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 MBOAT4Q96T53 435 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 HHLA2Q9UM44 414 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 LINC00312Q9Y6C7 94 aa8.83□□□□□ -1
VTI1BP3-201ENST00000550220 MINOS1-NBL1R4GNA1 71 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms