RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 FAM27D1Q5T7N8 215 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 GPR157Q5UAW9 335 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 SLC16A12Q6ZSM3 486 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 SATL1Q86VE3 508 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 CELF2-AS1Q8N7Q2 184 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 Q8TCH9 128 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 PIGCQ92535 297 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 RPL3LQ92901 407 aaKnown RBP11.13□□□□□ -0.63
NUP188-211ENST00000550219 ERGIC1Q969X5 290 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 DACT3Q96B18 629 aaPredicted RBP11.13□□□□□ -0.63
NUP188-211ENST00000550219 ITPKCQ96DU7 683 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 PAPOLGQ9BWT3 736 aaKnown RBP11.13□□□□□ -0.63
NUP188-211ENST00000550219 ZCCHC4Q9H5U6 513 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 TXNL4BQ9NX01 149 aaKnown RBP11.13□□□□□ -0.63
NUP188-211ENST00000550219 RNF7Q9UBF6 113 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 CTSZQ9UBR2 303 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 FOXJ3Q9UPW0 622 aa11.13□□□□□ -0.63
NUP188-211ENST00000550219 TRAV8-7A0A075B6U6 113 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 KIR2DS1A0A191URI9 304 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 A0A1W2PPK0 400 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 ZNF850A8MQ14 1090 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 LGALS8O00214 317 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 ADAM20O43506 726 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 AIREO43918 545 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 ARL6IP5O75915 188 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 GABARAPO95166 117 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 PTBP3O95758 552 aaKnown RBP11.12□□□□□ -0.63
NUP188-211ENST00000550219 GRPP07492 148 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 SFTPBP07988 381 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 ATF1P18846 271 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 GNALP38405 381 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 IL13RA1P78552 427 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 CEACAM21Q3KPI0 293 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 HSD17B12Q53GQ0 312 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 PRR31Q5SQ13 230 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 GPR107Q5VW38 600 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 C22orf42Q6IC83 251 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 C9orf139Q6ZV77 190 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 ZDHHC23Q8IYP9 409 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 SPERTQ8NA61 448 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 HPSE2Q8WWQ2 592 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 OR5P3Q8WZ94 311 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 ORAI1Q96D31 301 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 CHCHD6Q9BRQ6 235 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 FGF23Q9GZV9 251 aaPredicted RBP11.12□□□□□ -0.63
NUP188-211ENST00000550219 NAA50Q9GZZ1 169 aaKnown RBP11.12□□□□□ -0.63
NUP188-211ENST00000550219 C1orf123Q9NWV4 160 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 TAS2R4Q9NYW5 299 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 GSTK1Q9Y2Q3 226 aa11.12□□□□□ -0.63
NUP188-211ENST00000550219 IGHV3OR15-7A0A075B7D8 119 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 TRAV1-2A0A0B4J238 106 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.11□□□□□ -0.63
NUP188-211ENST00000550219 CLDN34H7C241 214 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 KCNAB3O43448 404 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 SULT1B1O43704 296 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 FSTL3O95633 263 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 GYPAP02724 150 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 ALDOBP05062 364 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 CD37P11049 281 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 SRMP19623 302 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 CFHR2P36980 270 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 KCNJ8Q15842 424 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 CTF1Q16619 201 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 FAM76BQ5HYJ3 339 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 ZNF841Q6ZN19 808 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 ZNF826PQ6ZT77 177 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 MOB3CQ70IA8 216 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 LRRTM1Q86UE6 522 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 DNAAF1Q8NEP3 725 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 OR1M1Q8NGA1 313 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 OR5A2Q8NGI9 324 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 OR51A2Q8NGJ7 313 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 OR13C9Q8NGT0 318 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 SPSB1Q96BD6 273 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 BCL7BQ9BQE9 202 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 CENPOQ9BU64 300 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 RBM38Q9H0Z9 239 aaKnown RBP11.11□□□□□ -0.63
NUP188-211ENST00000550219 SMURF1Q9HCE7 757 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 EXOSC4Q9NPD3 245 aaKnown RBP11.11□□□□□ -0.63
NUP188-211ENST00000550219 GPR173Q9NS66 373 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 SNTG1Q9NSN8 517 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 CKLFQ9UBR5 152 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 CEPT1Q9Y6K0 416 aa11.11□□□□□ -0.63
NUP188-211ENST00000550219 LOC100506127A0A0U1RQW1 187 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 SHISA3A0PJX4 238 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 PQLC2LA1A4F0 135 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 OOEPA6NGQ2 149 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 ANXA2P2A6NMY6 339 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 TOX4O94842 621 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 RAB3AP20336 220 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 PRKACBP22694 351 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 CALRP27797 417 aaKnown RBP11.1□□□□□ -0.63
NUP188-211ENST00000550219 NPY4RP50391 375 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 FUT6P51993 359 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 TMBIM6P55061 237 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 PPP3R1P63098 170 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 CNN3Q15417 329 aaKnown RBP11.1□□□□□ -0.63
NUP188-211ENST00000550219 CEP78Q5JTW2 689 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 PLCXD3Q63HM9 321 aa11.1□□□□□ -0.63
NUP188-211ENST00000550219 C16orf87Q6PH81 154 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms