RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 LINC00596Q86U02 117 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 FAM90A1Q86YD7 464 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 MUC20Q8N307 709 aaPredicted RBP10.01□□□□□ -0.81
DDB1-223ENST00000543658 MCFD2Q8NI22 146 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 MRPS24Q96EL2 167 aaKnown RBP10.01□□□□□ -0.81
DDB1-223ENST00000543658 NRIP2Q9BQI9 281 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 PIMREGQ9BSJ6 248 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 BARHL1Q9BZE3 327 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 SELENOIQ9C0D9 397 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 BANF2Q9H503 90 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 NLKQ9UBE8 527 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 COMMD3Q9UBI1 195 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 OR14J1Q9UGF5 321 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 RAB22AQ9UL26 194 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 SPATA2Q9UM82 520 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 CACNG2Q9Y698 323 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 LRBAP50851 2863 aa10.01□□□□□ -0.81
DDB1-223ENST00000543658 ARID1AO14497 2285 aa10□□□□□ -0.81
DDB1-223ENST00000543658 TMEM272A0A1B0GTI8 110 aa10□□□□□ -0.81
DDB1-223ENST00000543658 FAM25AB3EWG3 89 aa10□□□□□ -0.81
DDB1-223ENST00000543658 FAM25CB3EWG5 89 aa10□□□□□ -0.81
DDB1-223ENST00000543658 FAM25GB3EWG6 89 aa10□□□□□ -0.81
DDB1-223ENST00000543658 H3BUI4 141 aa10□□□□□ -0.81
DDB1-223ENST00000543658 LGALS8O00214 317 aa10□□□□□ -0.81
DDB1-223ENST00000543658 WNT9BO14905 357 aa10□□□□□ -0.81
DDB1-223ENST00000543658 SCGNO76038 276 aa10□□□□□ -0.81
DDB1-223ENST00000543658 PAHP00439 452 aa10□□□□□ -0.81
DDB1-223ENST00000543658 KNG1P01042 644 aa10□□□□□ -0.81
DDB1-223ENST00000543658 SFTPBP07988 381 aa10□□□□□ -0.81
DDB1-223ENST00000543658 MUC1P15941 1255 aaPredicted RBP10□□□□□ -0.81
DDB1-223ENST00000543658 EGR1P18146 543 aa10□□□□□ -0.81
DDB1-223ENST00000543658 RAB6AP20340 208 aa10□□□□□ -0.81
DDB1-223ENST00000543658 CPT2P23786 658 aa10□□□□□ -0.81
DDB1-223ENST00000543658 GABRR1P24046 479 aa10□□□□□ -0.81
DDB1-223ENST00000543658 S100A5P33763 92 aa10□□□□□ -0.81
DDB1-223ENST00000543658 GABRA2P47869 451 aa10□□□□□ -0.81
DDB1-223ENST00000543658 RBM11P57052 281 aaKnown RBP10□□□□□ -0.81
DDB1-223ENST00000543658 DSCR9P59020 149 aa10□□□□□ -0.81
DDB1-223ENST00000543658 BTG1P62324 171 aa10□□□□□ -0.81
DDB1-223ENST00000543658 IL13RA2Q14627 380 aa10□□□□□ -0.81
DDB1-223ENST00000543658 CNPY1Q3B7I2 92 aa10□□□□□ -0.81
DDB1-223ENST00000543658 SPIN3Q5JUX0 258 aa10□□□□□ -0.81
DDB1-223ENST00000543658 UBE2NLQ5JXB2 153 aa10□□□□□ -0.81
DDB1-223ENST00000543658 SFRP4Q6FHJ7 346 aaPredicted RBP10□□□□□ -0.81
DDB1-223ENST00000543658 ELP2Q6IA86 826 aa10□□□□□ -0.81
DDB1-223ENST00000543658 TGIF2LYQ8IUE0 185 aa10□□□□□ -0.81
DDB1-223ENST00000543658 LRRC75A-AS1Q8N1F1 130 aa10□□□□□ -0.81
DDB1-223ENST00000543658 ZNF525Q8N782 197 aa10□□□□□ -0.81
DDB1-223ENST00000543658 OR51T1Q8NGJ9 327 aa10□□□□□ -0.81
DDB1-223ENST00000543658 FAM168AQ92567 244 aa10□□□□□ -0.81
DDB1-223ENST00000543658 SLC25A28Q96A46 364 aa10□□□□□ -0.81
DDB1-223ENST00000543658 MBD6Q96DN6 1003 aa10□□□□□ -0.81
DDB1-223ENST00000543658 GAL3ST1Q99999 423 aa10□□□□□ -0.81
DDB1-223ENST00000543658 KCNK15Q9H427 330 aa10□□□□□ -0.81
DDB1-223ENST00000543658 HMG20AQ9NP66 347 aa10□□□□□ -0.81
DDB1-223ENST00000543658 OR5V1Q9UGF6 321 aa10□□□□□ -0.81
DDB1-223ENST00000543658 ST3GAL6Q9Y274 331 aa10□□□□□ -0.81
DDB1-223ENST00000543658 ANKRD17O75179 2603 aaKnown RBP10□□□□□ -0.81
DDB1-223ENST00000543658 IGHV3OR15-7A0A075B7D8 119 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 A0A1W2PP11 408 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 OR2AT4A6NND4 320 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 TMEM14DPA8MWL7 114 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 NDUFS8O00217 210 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 SH2D1BO14796 132 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 RP2O75695 350 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 OR7C1O76099 320 aaPredicted RBP9.99□□□□□ -0.81
DDB1-223ENST00000543658 ZNF205O95201 554 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 LHBP01229 141 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 ZNF44P15621 663 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 TALDO1P37837 337 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 MDH2P40926 338 aaKnown RBP9.99□□□□□ -0.81
DDB1-223ENST00000543658 ART1P52961 327 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 TMEM33P57088 247 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 ERVK11-1P61568 191 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 RPS27AP62979 156 aaKnown RBP9.99□□□□□ -0.81
DDB1-223ENST00000543658 SCN1BQ07699 218 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 IKZF1Q13422 519 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 MPV17LQ2QL34 196 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 FAM201AQ5SY85 155 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 AVPI1Q5T686 147 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 CRYBG3Q68DQ2 2970 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 OR10K2Q6IF99 312 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 SAMD12Q8N8I0 201 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 C19orf18Q8NEA5 215 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 DEFB108BQ8NET1 73 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 PTX4Q96A99 478 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 ATG5Q9H1Y0 275 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 WDR13Q9H1Z4 485 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 HES4Q9HCC6 221 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 RHBDL2Q9NX52 303 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 DCAF16Q9NXF7 216 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 PCDHB10Q9UN67 800 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 WIPI2Q9Y4P8 454 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 DCHS2Q6V1P9 2916 aa9.99□□□□□ -0.81
DDB1-223ENST00000543658 DOCK11Q5JSL3 2073 aa9.98□□□□□ -0.81
DDB1-223ENST00000543658 A0A075B6Q4 140 aa9.98□□□□□ -0.81
DDB1-223ENST00000543658 FAM90A10PA6NDY2 464 aa9.98□□□□□ -0.81
DDB1-223ENST00000543658 FAM90A18PA6NE21 464 aa9.98□□□□□ -0.81
DDB1-223ENST00000543658 FAM90A16PA6NEW6 464 aa9.98□□□□□ -0.81
DDB1-223ENST00000543658 FAM90A20PA6NIJ5 464 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms