RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 VAMP8Q9BV40 100 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 NMES1Q9C002 83 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 VAX2Q9UIW0 290 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 C14orf166Q9Y224 244 aaKnown RBP9.96□□□□□ -0.82
CDH4-201ENST00000543233 LSM5Q9Y4Y9 91 aaKnown RBP9.96□□□□□ -0.82
CDH4-201ENST00000543233 RTTNQ86VV8 2226 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 IGHV5-51A0A0C4DH38 117 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 TAAR5O14804 337 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 SRPX2O60687 465 aaPredicted RBP9.96□□□□□ -0.82
CDH4-201ENST00000543233 HIST1H1CP16403 213 aaKnown RBP9.96□□□□□ -0.82
CDH4-201ENST00000543233 PI3P19957 117 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 BCKDHBP21953 392 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 RPS27P42677 84 aaKnown RBP9.96□□□□□ -0.82
CDH4-201ENST00000543233 TDRG1Q3Y452 100 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 ZNF738Q8NE65 137 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 ZNF596Q8TC21 504 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 ZPLD1Q8TCW7 415 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 RASD2Q96D21 266 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 FOXN4Q96NZ1 517 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 TXN2Q99757 166 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 KLHDC3Q9BQ90 382 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 OR10A5Q9H207 317 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 SLCO5A1Q9H2Y9 848 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 DNAJB12Q9NXW2 375 aaKnown RBP9.96□□□□□ -0.82
CDH4-201ENST00000543233 LIPGQ9Y5X9 500 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 HS3ST3A1Q9Y663 406 aa9.96□□□□□ -0.82
CDH4-201ENST00000543233 TTC28Q96AY4 2481 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 H7C1C5 153 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 CLDN34H7C241 214 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 M0R296 226 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 ADRA2CP18825 462 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 CCKARP32238 428 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 LCN6P62502 163 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 OCIAD2Q56VL3 154 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 ANKRD16Q6P6B7 361 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 MED25Q71SY5 747 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 MCEMP1Q8IX19 187 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 PRRT1Q99946 306 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 FOXQ1Q9C009 403 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 ZNF701Q9NV72 531 aaPredicted RBP9.95□□□□□ -0.82
CDH4-201ENST00000543233 ZNF281Q9Y2X9 895 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 A0A0B4J2E0 115 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 A0A1B0GX12 115 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 TLCD2A6NGC4 264 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 SHISA7A6NL88 538 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 NUDT14O95848 222 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 TMEM33P57088 247 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 TMEM268Q5VZI3 342 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 CBLN3Q6UW01 205 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 ZNF709Q8N972 641 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 ORAOV1Q8WV07 137 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 ZNRF4Q8WWF5 429 aa9.95□□□□□ -0.82
CDH4-201ENST00000543233 A0A087WWC5 75 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 A0A1W2PPC4 97 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 A8MVM7 634 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 NKX2-2O95096 273 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 NDUFB8O95169 186 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 LYPD3O95274 346 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 OR3A2P47893 321 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 UBE2G2P60604 165 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 TMEM183BQ1AE95 376 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 GRINAQ7Z429 371 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 WDFY1Q8IWB7 410 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 TMEM229BQ8NBD8 167 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 MARCH1Q8TCQ1 289 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 ADAMTS18Q8TE60 1221 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 RPUSD4Q96CM3 377 aaKnown RBP9.94□□□□□ -0.82
CDH4-201ENST00000543233 HIPK2Q9H2X6 1198 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 CMC2Q9NRP2 79 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 TRBV6-7A0A0A0MS04 114 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 RBFOX3A6NFN3 312 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 ELOA3DA6NLF2 546 aaPredicted RBP9.94□□□□□ -0.82
CDH4-201ENST00000543233 DUS4LO95620 317 aaKnown RBP9.94□□□□□ -0.82
CDH4-201ENST00000543233 CAPZBP47756 277 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 ERVS71-1P61550 626 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 ELOA3BQ3SY89 546 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 MRPL52Q86TS9 123 aaKnown RBP9.94□□□□□ -0.82
CDH4-201ENST00000543233 NKAIN3Q8N8D7 197 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 ELOA3Q8NG57 546 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 CTHRC1Q96CG8 243 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 ADOQ96SZ5 270 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 SH3BGRL3Q9H299 93 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 CST9LQ9H4G1 147 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 FUT9Q9Y231 359 aa9.94□□□□□ -0.82
CDH4-201ENST00000543233 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.93□□□□□ -0.82
CDH4-201ENST00000543233 ARL4DP49703 201 aa9.93□□□□□ -0.82
CDH4-201ENST00000543233 HINT1P49773 126 aaPredicted RBP9.93□□□□□ -0.82
CDH4-201ENST00000543233 BLKP51451 505 aa9.93□□□□□ -0.82
CDH4-201ENST00000543233 ZNF41P51814 821 aaPredicted RBP9.93□□□□□ -0.82
CDH4-201ENST00000543233 HIST1H3AP68431 136 aa9.93□□□□□ -0.82
CDH4-201ENST00000543233 MPV17LQ2QL34 196 aa9.93□□□□□ -0.82
CDH4-201ENST00000543233 TMEM95Q3KNT9 176 aa9.93□□□□□ -0.82
CDH4-201ENST00000543233 HIKESHIQ53FT3 197 aa9.93□□□□□ -0.82
CDH4-201ENST00000543233 PRR27Q6MZM9 219 aa9.93□□□□□ -0.82
CDH4-201ENST00000543233 BCORP1Q8N888 145 aa9.93□□□□□ -0.82
CDH4-201ENST00000543233 GPX8Q8TED1 209 aa9.93□□□□□ -0.82
CDH4-201ENST00000543233 SMIM12Q96EX1 92 aa9.93□□□□□ -0.82
CDH4-201ENST00000543233 VSTM2LQ96N03 204 aa9.93□□□□□ -0.82
CDH4-201ENST00000543233 LRFN1Q9P244 771 aa9.93□□□□□ -0.82
CDH4-201ENST00000543233 WSB1Q9Y6I7 421 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms