RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	TRBV6-7	A0A0A0MS04	114 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FTCDNL1	E5RQL4	147 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783		H7C1Q1	480 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CCL21	O00585	134 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TSPAN15	O95858	294 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CSTB	P04080	98 aa	Known RBP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CCL3	P10147	92 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FOLR2	P14207	255 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	IL11	P20809	199 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RPS10	P46783	165 aa	Known RBP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CX3CR1	P49238	355 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	DVL1P1	P54792	670 aa	Predicted RBP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SUPT4H1	P63272	117 aa	Known RBP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TMEM128	Q5BJH2	165 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	WIPI1	Q5MNZ9	446 aa	Predicted RBP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	C1orf185	Q5T7R7	199 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TMEM244	Q5VVB8	128 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ALKBH2	Q6NS38	261 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	HOGA1	Q86XE5	327 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ST7L	Q8TDW4	575 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ASB17	Q8WXJ9	295 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	MED12	Q93074	2177 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF845	Q96IR2	970 aa	Predicted RBP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	OSGIN2	Q9Y236	505 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FANCM	Q8IYD8	2048 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	COL5A1	P20908	1838 aa	Predicted RBP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	MFNG	O00587	321 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RAD51D	O75771	328 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SFT2D2	O95562	160 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TXNDC12	O95881	172 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	GLP1R	P43220	463 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ASCL1	P50553	236 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	NDUFA6	P56556	154 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CYCS	P99999	105 aa	Known RBP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TSC22D1	Q15714	1073 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RNF212	Q495C1	297 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF565	Q8N9K5	539 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	OR5D18	Q8NGL1	313 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	APH1A	Q96BI3	265 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	METTL1	Q9UBP6	276 aa	Known RBP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FBXL17	Q9UF56	701 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RCL1	Q9Y2P8	373 aa	Known RBP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TIMM10B	Q9Y5J6	103 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RFNG	Q9Y644	331 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	IGKV1D-43	A0A0B4J1Z2	117 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783		A0A1B0GV90	55 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	C2orf72	A6NCS6	295 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF727	A8MUV8	499 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	NUDT19	A8MXV4	375 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FAM157A	C9JC47	383 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	AP4M1	O00189	453 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PHYH	O14832	338 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TSPAN2	O60636	221 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	HKR1	P10072	659 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PRF1	P14222	555 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	FCGR2C	P31995	323 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CSNK1A1	P48729	337 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	CLDN15	P56746	228 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TMEM33	P57088	247 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RAB2A	P61019	212 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ARFRP1	Q13795	201 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PNLIPRP3	Q17RR3	467 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	IAH1	Q2TAA2	248 aa	Predicted RBP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PLAC9	Q5JTB6	97 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	C1orf140	Q5VVS0	124 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	WDFY1	Q8IWB7	410 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	TMEM251	Q8N6I4	163 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ZNF383	Q8NA42	475 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	OR52N5	Q8NH56	324 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	NPRL2	Q8WTW4	380 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ERGIC1	Q969X5	290 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	ADIPOR1	Q96A54	375 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SAT2	Q96F10	170 aa	Predicted RBP	4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	EGLN1	Q9GZT9	426 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	G6PC2	Q9NQR9	355 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	GPR132	Q9UNW8	380 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	B3GALT5	Q9Y2C3	310 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	URGCP-MRPS24	S4R325	110 aa		4.96	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	DMD	P11532	3685 aa		4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783		A0A0A6YYD4	124 aa		4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	IGLV1-36	A0A0B4J1U3	117 aa		4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	MEGF11	A6BM72	1044 aa		4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	UMAD1	C9J7I0	102 aa		4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	AQP7	O14520	342 aa		4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	IFNA2	P01563	188 aa		4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	IGHV2-5	P01817	119 aa		4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PRH1	P02810	166 aa		4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RPL12	P30050	165 aa	Known RBP	4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	GPX4	P36969	197 aa	Predicted RBP	4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	OR3A2	P47893	321 aa		4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	SULT1A1	P50225	295 aa		4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	RPL27	P61353	136 aa	Known RBP	4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	PCBD1	P61457	104 aa		4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	KIAA0141	Q14154	515 aa	Predicted RBP	4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	LY6D	Q14210	128 aa		4.95	□□□□□ -1.62
RAPGEF4-215	ENST00000540783	GUK1	Q16774	197 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms