RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 UQCC1Q9NVA1 299 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 LOXL2Q9Y4K0 774 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 R4GN57 208 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 KIR2DS1A0A191URI9 304 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 HMGB3O15347 200 aaKnown RBP8.82□□□□□ -1
TRAF1-202ENST00000540010 VAMP5O95183 116 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 SP9P0CG40 484 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 KIR2DS4P43632 304 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 PMP22Q01453 160 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 KIR2DS1Q14954 304 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 ZNF468Q5VIY5 522 aaPredicted RBP8.82□□□□□ -1
TRAF1-202ENST00000540010 PPP1R35Q8TAP8 253 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 ASB5Q8WWX0 329 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 ROBO4Q8WZ75 1007 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 PLEKHF2Q9H8W4 249 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 ZFP64Q9NPA5 681 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 UFSP2Q9NUQ7 469 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 FBXL17Q9UF56 701 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 AMDHD2Q9Y303 409 aa8.82□□□□□ -1
TRAF1-202ENST00000540010 B3GALNT1O75752 331 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 PTAFRP25105 342 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 TMEM65Q6PI78 240 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 C1orf87Q8N0U7 546 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 GPX8Q8TED1 209 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 INTS12Q96CB8 462 aaKnown RBP8.81□□□□□ -1
TRAF1-202ENST00000540010 PGLYRP3Q96LB9 341 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 SLC17A5Q9NRA2 495 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 TECTAO75443 2155 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 EML5Q05BV3 1969 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 A0A1W2PPQ1 181 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 C5orf49A4QMS7 147 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 VSTM5A8MXK1 200 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 DEGS1O15121 323 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 CST4P01036 141 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 BGLAPP02818 100 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 CRHP06850 196 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 PTGFRP43088 359 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 PSMB3P49720 205 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 RRADP55042 308 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 FHL1Q13642 323 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 UQCC3Q6UW78 93 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 SPACA9Q96E40 222 aaPredicted RBP8.81□□□□□ -1
TRAF1-202ENST00000540010 TVP23CQ96ET8 276 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 MRGPRX4Q96LA9 322 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 OSGIN2Q9Y236 505 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 SERPINE3A8MV23 424 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 ZNF587BE7ETH6 402 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 HLA-DOBP13765 273 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 KCNJ3P48549 501 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 CYB561P49447 251 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 LIMK1P53667 647 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 TMEM33P57088 247 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 EXT1Q16394 746 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 ISXQ2M1V0 245 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 OR2T2Q6IF00 324 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 ZNF524Q96C55 264 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 RASL10BQ96S79 203 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 GPX7Q96SL4 187 aaPredicted RBP8.81□□□□□ -1
TRAF1-202ENST00000540010 WDR54Q9H977 334 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 MMP26Q9NRE1 261 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 RNF150Q9ULK6 438 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 RCL1Q9Y2P8 373 aaKnown RBP8.81□□□□□ -1
TRAF1-202ENST00000540010 PLSCR5A0PG75 271 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 SFT2D2O95562 160 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 CELA2AP08217 269 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 EDDM3BP56851 147 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 RNF212Q495C1 297 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 CLEC18BQ6UXF7 455 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 AMELYQ99218 206 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 CRLF2Q9HC73 371 aa8.81□□□□□ -1
TRAF1-202ENST00000540010 ARGFXA6NJG6 315 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 TNFSF11O14788 317 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 HNF1AP20823 631 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 FPR2P25090 351 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 ACKR3P25106 362 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 SNCAP37840 140 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 BAGE3Q86Y29 109 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 BAGE2Q86Y30 109 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 CDC20BQ86Y33 519 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 C17orf78Q8N4C9 275 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 ZNF485Q8NCK3 441 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 ADAD2Q8NCV1 583 aaKnown RBP8.8□□□□□ -1
TRAF1-202ENST00000540010 ZNRF4Q8WWF5 429 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 ASB13Q8WXK3 278 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 GNPNAT1Q96EK6 184 aaPredicted RBP8.8□□□□□ -1
TRAF1-202ENST00000540010 PLPPR2Q96GM1 343 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 GAR1Q9NY12 217 aaKnown RBP8.8□□□□□ -1
TRAF1-202ENST00000540010 ZMIZ1Q9ULJ6 1067 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 DOPEY2Q9Y3R5 2298 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 J3QRE1 110 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 NTN3O00634 580 aaPredicted RBP8.8□□□□□ -1
TRAF1-202ENST00000540010 PLPP3O14495 311 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 ADAM10O14672 748 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 GPR37O15354 613 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 PIN1P1O15428 100 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 SOX15O60248 233 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 SUMO3P55854 103 aaPredicted RBP8.8□□□□□ -1
TRAF1-202ENST00000540010 CEACAM16Q2WEN9 425 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 GGNBP1Q5YKI7 109 aa8.8□□□□□ -1
TRAF1-202ENST00000540010 OSR2Q8N2R0 312 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms