RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 FAM90A16PA6NEW6 464 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 FAM90A20PA6NIJ5 464 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 FAM90A8PA6NJQ4 464 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 FAM90A7PA6NKC0 464 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 FAM90A22PA8MWA6 464 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 FAM90A12PA8MX19 464 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 FAM90A5PA8MXJ8 464 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 FAM90A23PA8MXZ1 464 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 IFNL4K9M1U5 179 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 PTBP3O95758 552 aaKnown RBP13.06□□□□□ -0.32
VAMP1-207ENST00000539047 IGKV1D-12P01611 117 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 ACAA1P09110 424 aaPredicted RBP13.06□□□□□ -0.32
VAMP1-207ENST00000539047 FAM90A15PP0C7V4 464 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 FAM90A13PP0C7W8 464 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 FAM90A14PP0C7W9 464 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 FAM90A24PP0C7X0 464 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 PGA5P0DJD9 388 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 MRPS15P82914 257 aaKnown RBP13.06□□□□□ -0.32
VAMP1-207ENST00000539047 SRSF1Q07955 248 aaKnown RBP eCLIP13.06□□□□□ -0.32
VAMP1-207ENST00000539047 PLA2G7Q13093 441 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 IL13RA2Q14627 380 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 ZNF181Q2M3W8 571 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 MPV17LQ2QL34 196 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 NHLRC3Q5JS37 347 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 MOGAT3Q86VF5 341 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 C1orf87Q8N0U7 546 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 Q8N402 240 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 DTX3Q8N9I9 347 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 LILRB1Q8NHL6 650 aaPredicted RBP13.06□□□□□ -0.32
VAMP1-207ENST00000539047 ZFAND2BQ8WV99 257 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 SPACA1Q9HBV2 294 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 RBFOX1Q9NWB1 397 aaKnown RBP13.06□□□□□ -0.32
VAMP1-207ENST00000539047 RASL12Q9NYN1 266 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 MTCH1Q9NZJ7 389 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 PPP1R3CQ9UQK1 317 aa13.06□□□□□ -0.32
VAMP1-207ENST00000539047 TANC2Q9HCD6 1990 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 TEX15Q9BXT5 2789 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 CHD3Q12873 2000 aaKnown RBP13.05□□□□□ -0.32
VAMP1-207ENST00000539047 CTDSPLO15194 276 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 NOS1APO75052 506 aaPredicted RBP13.05□□□□□ -0.32
VAMP1-207ENST00000539047 RHBDL1O75783 438 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 SFTPBP07988 381 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 GSTP1P09211 210 aaKnown RBP13.05□□□□□ -0.32
VAMP1-207ENST00000539047 RNF224P0DH78 156 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 GLRA1P23415 457 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 BLVRBP30043 206 aaPredicted RBP13.05□□□□□ -0.32
VAMP1-207ENST00000539047 IKZF1Q13422 519 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 ZNF79Q15937 498 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 SPIN3Q5JUX0 258 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 WDR82Q6UXN9 313 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 C19orf18Q8NEA5 215 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 Q8NFD4 153 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 LRRC29Q8WV35 223 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 FCAMRQ8WWV6 532 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 VRK1Q99986 396 aaPredicted RBP13.05□□□□□ -0.32
VAMP1-207ENST00000539047 NRIP2Q9BQI9 281 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 NICN1Q9BSH3 213 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 RAB1BQ9H0U4 201 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 NPTNQ9Y639 398 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 CENPEQ02224 2701 aa13.05□□□□□ -0.32
VAMP1-207ENST00000539047 PLCE1Q9P212 2302 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 UPK1BO75841 260 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 OR7C1O76099 320 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-207ENST00000539047 HIST1H1DP16402 221 aaKnown RBP13.04□□□□□ -0.32
VAMP1-207ENST00000539047 PRSS3P35030 304 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 NPBWR2P48146 333 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 SNU13P55769 128 aaKnown RBP13.04□□□□□ -0.32
VAMP1-207ENST00000539047 DEFA1P59665 94 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 DEFA3P59666 94 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 GNG2P59768 71 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 CCL8P80075 99 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 TLE4Q04727 773 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 MPPED2Q15777 294 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 SWI5Q1ZZU3 235 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 PIGYQ3MUY2 71 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 NKAPLQ5M9Q1 402 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 HACD4Q5VWC8 232 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 Q6ZTK2 550 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 BATF2Q8N1L9 274 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 FAM89BQ8N5H3 189 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 SOSTQ9BQB4 213 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 SCPEP1Q9HB40 452 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 ABCB10Q9NRK6 738 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 PLEKHJ1Q9NW61 149 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 RNF7Q9UBF6 113 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 DNAJB11Q9UBS4 358 aa13.04□□□□□ -0.32
VAMP1-207ENST00000539047 SPTBN1Q01082 2364 aaKnown RBP13.03□□□□□ -0.32
VAMP1-207ENST00000539047 A1L4Q6 167 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 SERPINE3A8MV23 424 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 GABARAPH6UMI1 98 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 RAB27BO00194 218 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 SULT1C2O00338 296 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 SH2D1BO14796 132 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 GSTZ1O43708 216 aaPredicted RBP13.03□□□□□ -0.32
VAMP1-207ENST00000539047 PDCD6O75340 191 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 CFHR2P36980 270 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 PTH2RP49190 550 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 AP3S2P59780 193 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 ACTBP60709 375 aa13.03□□□□□ -0.32
VAMP1-207ENST00000539047 GMFBP60983 142 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms