RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ACTG2P63267 376 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 RAB40BQ12829 278 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 ZNF273Q14593 569 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 C17orf107Q6ZR85 190 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 UTS2BQ765I0 119 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 EGFL6Q8IUX8 553 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 SYS1Q8N2H4 156 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 OR10AC1Q8NH08 325 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 C17orf50Q8WW18 174 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 PP6455Q8WZ26 134 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 C4orf36Q96KX1 117 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 Q96MT0 163 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 ALG8Q9BVK2 526 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 AMBNQ9NP70 447 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 SMPD3Q9NY59 655 aaPredicted RBP12.22□□□□□ -0.45
RAB40B-202ENST00000538809 MTCH1Q9NZJ7 389 aa12.22□□□□□ -0.45
RAB40B-202ENST00000538809 TET2Q6N021 2002 aaPredicted RBP12.21□□□□□ -0.45
RAB40B-202ENST00000538809 A0A1B0GUS0 222 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 MEX3AA1L020 520 aaKnown RBP12.21□□□□□ -0.45
RAB40B-202ENST00000538809 CLPSL1A2RUU4 121 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 BTBD17A6NE02 478 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 J3QLW9 94 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 ZNF19P17023 458 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 COX7A1P24310 79 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 PAX6P26367 422 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 ERVFRD-1P60508 538 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 RPL15P61313 204 aaKnown RBP12.21□□□□□ -0.45
RAB40B-202ENST00000538809 COL10A1Q03692 680 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 ALKBH1Q13686 389 aaKnown RBP12.21□□□□□ -0.45
RAB40B-202ENST00000538809 TMEM200BQ69YZ2 307 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 DHRS7BQ6IAN0 325 aaPredicted RBP12.21□□□□□ -0.45
RAB40B-202ENST00000538809 BRICD5Q6PL45 260 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 GDPGP1Q6ZNW5 385 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 SLC25A26Q70HW3 274 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 LHFPL3Q86UP9 236 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 ASCC1Q8N9N2 400 aaKnown RBP12.21□□□□□ -0.45
RAB40B-202ENST00000538809 DNAAF1Q8NEP3 725 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 OR51A4Q8NGJ6 313 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 OR52I1Q8NGK6 324 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 OR5D13Q8NGL4 314 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 BORCS8Q96FH0 119 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 CEP19Q96LK0 163 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 JAM3Q9BX67 310 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 ISG20L2Q9H9L3 353 aaKnown RBP12.21□□□□□ -0.45
RAB40B-202ENST00000538809 INPP5EQ9NRR6 644 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 ERVK13-1Q9NX77 482 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 IL36RNQ9UBH0 155 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 VPREB3Q9UKI3 123 aa12.21□□□□□ -0.45
RAB40B-202ENST00000538809 FADS2O95864 444 aaKnown RBP12.2□□□□□ -0.46
RAB40B-202ENST00000538809 TK1P04183 234 aa12.2□□□□□ -0.46
RAB40B-202ENST00000538809 POU3F4P49335 361 aa12.2□□□□□ -0.46
RAB40B-202ENST00000538809 BMXP51813 675 aa12.2□□□□□ -0.46
RAB40B-202ENST00000538809 KRTAP10-3P60369 221 aa12.2□□□□□ -0.46
RAB40B-202ENST00000538809 ACSM1Q08AH1 577 aa12.2□□□□□ -0.46
RAB40B-202ENST00000538809 CNN3Q15417 329 aaKnown RBP12.2□□□□□ -0.46
RAB40B-202ENST00000538809 SMN1Q16637 294 aaKnown RBP12.2□□□□□ -0.46
RAB40B-202ENST00000538809 LPCAT4Q643R3 524 aa12.2□□□□□ -0.46
RAB40B-202ENST00000538809 CRIP3Q6Q6R5 217 aa12.2□□□□□ -0.46
RAB40B-202ENST00000538809 ZNF782Q6ZMW2 699 aaPredicted RBP12.2□□□□□ -0.46
RAB40B-202ENST00000538809 Q6ZSV7 163 aa12.2□□□□□ -0.46
RAB40B-202ENST00000538809 LINC01006Q8NI28 216 aa12.2□□□□□ -0.46
RAB40B-202ENST00000538809 STMN2Q93045 179 aa12.2□□□□□ -0.46
RAB40B-202ENST00000538809 HHLA2Q9UM44 414 aa12.2□□□□□ -0.46
RAB40B-202ENST00000538809 SF3B6Q9Y3B4 125 aaKnown RBP12.2□□□□□ -0.46
RAB40B-202ENST00000538809 RPL36Q9Y3U8 105 aaKnown RBP12.2□□□□□ -0.46
RAB40B-202ENST00000538809 RNF114Q9Y508 228 aa12.2□□□□□ -0.46
RAB40B-202ENST00000538809 E9PI62 339 aa12.19□□□□□ -0.46
RAB40B-202ENST00000538809 H3BUX3 64 aa12.19□□□□□ -0.46
RAB40B-202ENST00000538809 ZNF737O75373 536 aa12.19□□□□□ -0.46
RAB40B-202ENST00000538809 SERPINA3P01011 423 aa12.19□□□□□ -0.46
RAB40B-202ENST00000538809 LIMS3P0CW19 117 aa12.19□□□□□ -0.46
RAB40B-202ENST00000538809 LIMS4P0CW20 117 aa12.19□□□□□ -0.46
RAB40B-202ENST00000538809 CALCBP10092 127 aa12.19□□□□□ -0.46
RAB40B-202ENST00000538809 ZNF20P17024 532 aa12.19□□□□□ -0.46
RAB40B-202ENST00000538809 ATF1P18846 271 aa12.19□□□□□ -0.46
RAB40B-202ENST00000538809 SNU13P55769 128 aaKnown RBP12.19□□□□□ -0.46
RAB40B-202ENST00000538809 ZNF691Q5VV52 312 aa12.19□□□□□ -0.46
RAB40B-202ENST00000538809 C11orf42Q8N5U0 333 aa12.19□□□□□ -0.46
RAB40B-202ENST00000538809 EMG1Q92979 244 aaKnown RBP12.19□□□□□ -0.46
RAB40B-202ENST00000538809 RFT1Q96AA3 541 aa12.19□□□□□ -0.46
RAB40B-202ENST00000538809 FGGYQ96C11 551 aa12.19□□□□□ -0.46
RAB40B-202ENST00000538809 MRPL48Q96GC5 212 aaKnown RBP12.19□□□□□ -0.46
RAB40B-202ENST00000538809 AJUBAQ96IF1 538 aa12.19□□□□□ -0.46
RAB40B-202ENST00000538809 SEBOXQ9HB31 216 aaPredicted RBP12.19□□□□□ -0.46
RAB40B-202ENST00000538809 FGF20Q9NP95 211 aaPredicted RBP12.19□□□□□ -0.46
RAB40B-202ENST00000538809 A0A1W2PPH5 198 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 K7N7A8 449 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 CLIC3O95833 236 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 MT-ND2P03891 347 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 BCL3P20749 454 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 AZGP1P25311 298 aaKnown RBP12.18□□□□□ -0.46
RAB40B-202ENST00000538809 PEX2P28328 305 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 RBP2P50120 134 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 EDDM3BP56851 147 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 ADARB1P78563 741 aaKnown RBP12.18□□□□□ -0.46
RAB40B-202ENST00000538809 EDDM3AQ14507 147 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 LY6EQ16553 131 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 MIDNQ504T8 468 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 KLHL22Q53GT1 634 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 TREML4Q6UXN2 200 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms