RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CSTBP04080 98 aaKnown RBP13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 PRKACAP17612 351 aa13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 CD80P33681 288 aa13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 TESK1Q15569 626 aa13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 PCGF3Q3KNV8 242 aa13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 OR2W3Q7Z3T1 314 aa13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 CENPSQ8N2Z9 138 aa13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 GCSAMQ8N6F7 178 aa13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 KCNG3Q8TAE7 436 aa13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 EMG1Q92979 244 aaKnown RBP13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 MRI1Q9BV20 369 aa13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 EGLN1Q9GZT9 426 aa13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 CST11Q9H112 138 aa13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 EXTL2Q9UBQ6 330 aa13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 RAB22AQ9UL26 194 aa13.18□□□□□ -0.3
SFSWAP-206ENST00000537582 CENPEQ02224 2701 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 AKAP6Q13023 2319 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 IGHV3OR15-7A0A075B7D8 119 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 SOCS1O15524 211 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 TMEM127O75204 238 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 APOA1P02647 267 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 TNFRSF1AP19438 455 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 CDK2P24941 298 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 S100A5P33763 92 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 CEBPDP49716 269 aaPredicted RBP13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 SCAND1P57086 179 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 RPS27AP62979 156 aaKnown RBP13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 TAF9Q16594 264 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 CCDC190Q86UF4 302 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 OSR2Q8N2R0 312 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 Q8NFD4 153 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 YIPF5Q969M3 257 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 C14orf79Q96F83 325 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 Q96M66 194 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 WDFY2Q96P53 400 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 ABCG5Q9H222 651 aa13.17□□□□□ -0.3
SFSWAP-206ENST00000537582 GEMIN2O14893 280 aaKnown RBP13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 NXPH2O95156 264 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 PTHLHP12272 177 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 GTF2F2P13984 249 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 RAB6AP20340 208 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 GABRR1P24046 479 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 COL8A2P25067 703 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 CD40LGP29965 261 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 VEGFCP49767 419 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 RBM11P57052 281 aaKnown RBP13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 FGF12P61328 243 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 SFRP4Q6FHJ7 346 aaPredicted RBP13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 ELP2Q6IA86 826 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 C20orf204Q6ZNR8 217 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 LRRC28Q86X40 367 aaPredicted RBP13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 FAM58AQ8N1B3 248 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 OR51T1Q8NGJ9 327 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 Q8TCH9 128 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 CCL17Q92583 94 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 DIRAS2Q96HU8 199 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 CCL19Q99731 98 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 HES4Q9HCC6 221 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 ST3GAL6Q9Y274 331 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 V9GYH0 126 aa13.16□□□□□ -0.3
SFSWAP-206ENST00000537582 IGHV1-69-2A0A0G2JMI3 117 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 SRRM5B3KS81 715 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 H7C417 338 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 OVOL3O00110 214 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 NOS1APO75052 506 aaPredicted RBP13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 LHBP01229 141 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 GPR176Q14439 515 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 SIGIRRQ6IA17 410 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 BRICD5Q6PL45 260 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 ZNF554Q86TJ5 538 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 OR5T2Q8NGG2 359 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 GCDHQ92947 438 aaPredicted RBP13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 PTX4Q96A99 478 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 TM2D1Q9BX74 207 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 RAB1BQ9H0U4 201 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 ZMAT3Q9HA38 289 aaKnown RBP13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 RNF7Q9UBF6 113 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 ELF5Q9UKW6 265 aaPredicted RBP13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 A0A0G2JMP0 313 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 A0A0X1KG70 313 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 RAB27BO00194 218 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 ZNF780AO75290 641 aaPredicted RBP13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 GLRA1P23415 457 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 CFHR2P36980 270 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 CAPZA1P52907 286 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 PPP5CP53041 499 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 OXA1LQ15070 435 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 PLAC9Q5JTB6 97 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 OLFML2AQ68BL7 652 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 ACP7Q6ZNF0 438 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 CDH24Q86UP0 819 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 OR4M2Q8NGB6 313 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 TMEM106BQ9NUM4 274 aa13.15□□□□□ -0.3
SFSWAP-206ENST00000537582 DSCAMO60469 2012 aa13.15□□□□□ -0.31
SFSWAP-206ENST00000537582 PTPN13Q12923 2485 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 FOXI3A8MTJ6 420 aaPredicted RBP13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 ACAA1P09110 424 aaPredicted RBP13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 PITPNBP48739 271 aa13.14□□□□□ -0.31
SFSWAP-206ENST00000537582 PTH2RP49190 550 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms