RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 MTCH1Q9NZJ7 389 aa13.16□□□□□ -0.3
CLSTN3-204ENST00000535313 FBLN5Q9UBX5 448 aa13.16□□□□□ -0.3
CLSTN3-204ENST00000535313 ORC6Q9Y5N6 252 aa13.16□□□□□ -0.3
CLSTN3-204ENST00000535313 LOC107986453A0A1B0GWG9 222 aa13.15□□□□□ -0.3
CLSTN3-204ENST00000535313 INMTO95050 263 aa13.15□□□□□ -0.3
CLSTN3-204ENST00000535313 EDDM3BP56851 147 aa13.15□□□□□ -0.3
CLSTN3-204ENST00000535313 ZNF85Q03923 595 aa13.15□□□□□ -0.3
CLSTN3-204ENST00000535313 C2orf68Q2NKX9 166 aa13.15□□□□□ -0.3
CLSTN3-204ENST00000535313 TP53I3Q53FA7 332 aa13.15□□□□□ -0.3
CLSTN3-204ENST00000535313 PDLIM3Q53GG5 364 aaPredicted RBP13.15□□□□□ -0.3
CLSTN3-204ENST00000535313 SLC25A26Q70HW3 274 aa13.15□□□□□ -0.3
CLSTN3-204ENST00000535313 EGFL6Q8IUX8 553 aa13.15□□□□□ -0.3
CLSTN3-204ENST00000535313 PRSS35Q8N3Z0 413 aa13.15□□□□□ -0.3
CLSTN3-204ENST00000535313 PP6455Q8WZ26 134 aa13.15□□□□□ -0.3
CLSTN3-204ENST00000535313 IGKV1-27A0A075B6S5 117 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 C17orf98A8MV24 154 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 F8VVB4 439 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 F8VWA3 439 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 ZNF737O75373 536 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 CYB5AP00167 134 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 ZNF728P0DKX0 622 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 PAX6P26367 422 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 ATP1B3P54709 279 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 ISL1P61371 349 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 ACTC1P68032 377 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 ACTA1P68133 377 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 TMEM244Q5VVB8 128 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 C11orf88Q6PI97 169 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 LIAT1Q6ZQX7 453 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 Q6ZTK2 550 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 Q8IYB0 196 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 ENTHD1Q8IYW4 607 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 RDH10Q8IZV5 341 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 OR8H2Q8N162 312 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 DTX3Q8N9I9 347 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 OR13D1Q8NGV5 346 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 PPP1R35Q8TAP8 253 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 EMG1Q92979 244 aaKnown RBP13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 SNX22Q96L94 193 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 NPFFR1Q9GZQ6 430 aa13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 RANBP3Q9H6Z4 567 aaPredicted RBP13.14□□□□□ -0.31
CLSTN3-204ENST00000535313 DAPL1A0PJW8 107 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 ERICH4A6NGS2 130 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 RBP4P02753 201 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 ARG1P05089 322 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 KIR3DL2P43630 455 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 KIR2DS4P43632 304 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 RBP2P50120 134 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 DLX6P56179 175 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 HERPUD1Q15011 391 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 KCTD20Q7Z5Y7 419 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 DNAAF1Q8NEP3 725 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 OR2G2Q8NGZ5 317 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 OR2T6Q8NHC8 308 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 PYDC1Q8WXC3 89 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 FOXRED1Q96CU9 486 aaPredicted RBP13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 SIGLEC9Q9Y336 463 aa13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 TBL2Q9Y4P3 447 aaKnown RBP13.13□□□□□ -0.31
CLSTN3-204ENST00000535313 TGP01266 2768 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 hADV38S2A0JD32 116 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 SNTNA6NMZ2 147 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 ENTPD6O75354 484 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 TSPAN15O95858 294 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 HAND1O96004 215 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 ALPLP05186 524 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 CSF1P09603 554 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 OCM2P0CE71 109 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 OCMP0CE72 109 aaPredicted RBP13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 ZNF20P17024 532 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 PRKACBP22694 351 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 PEX2P28328 305 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 POU3F4P49335 361 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 MTCP1P56278 107 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 MEF2CQ06413 473 aaPredicted RBP13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 EDDM3AQ14507 147 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 SLC25A30Q5SVS4 291 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 MEDAGQ5VYS4 303 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 LHFPL4Q7Z7J7 247 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 FAM110DQ8TAY7 271 aaPredicted RBP13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 RNFT2Q96EX2 444 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 ADAT3Q96EY9 351 aaPredicted RBP13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 HRASLS5Q96KN8 279 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 ZNF714Q96N38 554 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 ABCB10Q9NRK6 738 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 GLS2Q9UI32 602 aa13.12□□□□□ -0.31
CLSTN3-204ENST00000535313 TRBV2A0A0J9YWF9 115 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 TMEM82A0PJX8 343 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 MEX3AA1L020 520 aaKnown RBP13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 FAM90A8PA6NJQ4 464 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 VGLL3A8MV65 326 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 EI24O14681 340 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 SLC16A6O15403 523 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 ISG15P05161 165 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 HTR1AP08908 422 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 IGHV1-8P0DP01 117 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 ATF1P18846 271 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 GABRR1P24046 479 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 EFNB2P52799 333 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 SNRPGP62308 76 aaKnown RBP13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 DYNC1I2Q13409 638 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms