RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 FOXH1O75593 365 aa13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 OR3A4PP47883 348 aa13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 NPY4RP50391 375 aa13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 ESCO2Q56NI9 601 aa13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 ELP2Q6IA86 826 aa13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 FIP1L1Q6UN15 594 aaKnown RBP13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 ZNF788Q6ZQV5 615 aa13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 OR5T2Q8NGG2 359 aa13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 EMG1Q92979 244 aaKnown RBP13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 SDSLQ96GA7 329 aa13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 MED30Q96HR3 178 aa13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 CCL13Q99616 98 aa13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 CNTD2Q9H8S5 307 aa13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 HMG20AQ9NP66 347 aa13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 RBFOX1Q9NWB1 397 aaKnown RBP13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 IL36GQ9NZH8 169 aa13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 CTSZQ9UBR2 303 aa13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 POLR3KQ9Y2Y1 108 aaPredicted RBP13.71□□□□□ -0.21
PACSIN3-210ENST00000533686 MED13LQ71F56 2210 aa13.71□□□□□ -0.22
PACSIN3-210ENST00000533686 NKX6-3A6NJ46 265 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 RFPL4AA6NLU0 287 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 RFPL4AL1F8VTS6 287 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 SIGLEC5O15389 551 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 TMPRSS2O15393 492 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 ZNF780AO75290 641 aaPredicted RBP13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 SFTPBP07988 381 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 MSMBP08118 114 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 PRDX2P32119 198 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 PITPNBP48739 271 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 MTNR1BP49286 362 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 PSMD7P51665 324 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 C11orf91Q3C1V1 193 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 C1orf100Q5SVJ3 147 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 C22orf42Q6IC83 251 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 GDPGP1Q6ZNW5 385 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 BATF2Q8N1L9 274 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 YIPF6Q96EC8 236 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 GAFA1Q96PS6 74 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 S100A13Q99584 98 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 SSBP3Q9BWW4 388 aaPredicted RBP13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 FAM192AQ9GZU8 254 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 METTL9Q9H1A3 318 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 OR51E2Q9H255 320 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 EXOSC4Q9NPD3 245 aaKnown RBP13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 PCDHB16Q9NRJ7 776 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 TXNL4BQ9NX01 149 aaKnown RBP13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 CLN8Q9UBY8 286 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 GSTK1Q9Y2Q3 226 aa13.7□□□□□ -0.22
PACSIN3-210ENST00000533686 PPIAL4CA0A0B4J2A2 164 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 LY6G6DO95868 133 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 GABRA2P47869 451 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 FGF12P61328 243 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 SEC61A1P61619 476 aaKnown RBP13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 GNB2P62879 340 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 IL13RA1P78552 427 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 GPR176Q14439 515 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 ZNF146Q15072 292 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 RSU1Q15404 277 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 TIMM50Q3ZCQ8 353 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 SPIN3Q5JUX0 258 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 WDR25Q64LD2 544 aaPredicted RBP13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 CLEC9AQ6UXN8 241 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 CD177Q8N6Q3 437 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 NKX3-1Q99801 234 aaPredicted RBP13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 SMR3AQ99954 134 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 GHRLQ9UBU3 117 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 ING4Q9UNL4 249 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 MRPS28Q9Y2Q9 187 aaKnown RBP13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 CSPG4Q6UVK1 2322 aa13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 YLPM1P49750 1951 aaKnown RBP13.69□□□□□ -0.22
PACSIN3-210ENST00000533686 ABCA1O95477 2261 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 TRAV20A0A0B4J274 112 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 KIAA1324LA8MWY0 1029 aaPredicted RBP13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 DVL1O14640 695 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 PDCD5O14737 125 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 GPR37O15354 613 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 CDRT1O95170 752 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 TGFAP01135 160 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 CHRM2P08172 466 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 PRKACAP17612 351 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 GADD45AP24522 165 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 MYL9P24844 172 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 ZFP36P26651 326 aaKnown RBP13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 RANBP1P43487 201 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 DVL1P1P54792 670 aaPredicted RBP13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 GLIPR1L1Q6UWM5 242 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 ZNF561Q8N587 486 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 FAM216BQ8N7L0 139 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 OR4D6Q8NGJ1 314 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 OR51T1Q8NGJ9 327 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 OR13F1Q8NGS4 319 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 TBC1D15Q8TC07 691 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 GFI1Q99684 422 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 CHCHD6Q9BRQ6 235 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 ELL3Q9HB65 397 aaPredicted RBP13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 GLS2Q9UI32 602 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 AK6Q9Y3D8 172 aaKnown RBP13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 MAB21L2Q9Y586 359 aa13.68□□□□□ -0.22
PACSIN3-210ENST00000533686 A0A1B0GW55 424 aa13.67□□□□□ -0.22
PACSIN3-210ENST00000533686 SHISA3A0PJX4 238 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms