RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 KNG1P01042 644 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 USF1P22415 310 aaPredicted RBP14.15□□□□□ -0.14
SF3B2-211ENST00000531041 TGFBR1P36897 503 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 RANBP1P43487 201 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 BMXP51813 675 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 LOXL1Q08397 574 aaPredicted RBP14.15□□□□□ -0.14
SF3B2-211ENST00000531041 GPR176Q14439 515 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 STUMQ69YW2 141 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 GLIPR1L1Q6UWM5 242 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 SPNS3Q6ZMD2 512 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 CLVS1Q8IUQ0 354 aaPredicted RBP14.15□□□□□ -0.14
SF3B2-211ENST00000531041 EMG1Q92979 244 aaKnown RBP14.15□□□□□ -0.14
SF3B2-211ENST00000531041 SLC25A28Q96A46 364 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 GAL3ST1Q99999 423 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 ELL3Q9HB65 397 aaPredicted RBP14.15□□□□□ -0.14
SF3B2-211ENST00000531041 HMG20AQ9NP66 347 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 PCDHB16Q9NRJ7 776 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 A0A0G2JK05 382 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 IFITM5A6NNB3 132 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 CEACAM18A8MTB9 384 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 NOTOA8MTQ0 251 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 RNF223E7ERA6 249 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 IL1AP01583 271 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 UBBP0CG47 229 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 PSG2P11465 335 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 CPT2P23786 658 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 TMBIM6P55061 237 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 FGF12P61328 243 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 VBP1P61758 197 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 NCS1P62166 190 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 MXD1Q05195 221 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 BLMHQ13867 455 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 DGUOKQ16854 277 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 ATPAF1Q5TC12 328 aaPredicted RBP14.15□□□□□ -0.14
SF3B2-211ENST00000531041 OR5T2Q8NGG2 359 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 CLDND2Q8NHS1 167 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 ANGPTL6Q8NI99 470 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 DSCAML1Q8TD84 2053 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 RAB2BQ8WUD1 216 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 BCL7BQ9BQE9 202 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 DNTTIP1Q9H147 329 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 NARFLQ9H6Q4 476 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 SEBOXQ9HB31 216 aaPredicted RBP14.15□□□□□ -0.14
SF3B2-211ENST00000531041 MIOXQ9UGB7 285 aa14.15□□□□□ -0.14
SF3B2-211ENST00000531041 ABCA2Q9BZC7 2435 aa14.14□□□□□ -0.15
SF3B2-211ENST00000531041 FLNAP21333 2647 aaKnown RBP14.14□□□□□ -0.15
SF3B2-211ENST00000531041 AIPO00170 330 aa14.14□□□□□ -0.15
SF3B2-211ENST00000531041 HTR3BO95264 441 aa14.14□□□□□ -0.15
SF3B2-211ENST00000531041 GYPAP02724 150 aa14.14□□□□□ -0.15
SF3B2-211ENST00000531041 CSTBP04080 98 aaKnown RBP14.14□□□□□ -0.15
SF3B2-211ENST00000531041 PRKACAP17612 351 aa14.14□□□□□ -0.15
SF3B2-211ENST00000531041 LMO4P61968 165 aa14.14□□□□□ -0.15
SF3B2-211ENST00000531041 ZNF146Q15072 292 aa14.14□□□□□ -0.15
SF3B2-211ENST00000531041 RAB11BQ15907 218 aa14.14□□□□□ -0.15
SF3B2-211ENST00000531041 SLC22A6Q4U2R8 563 aa14.14□□□□□ -0.15
SF3B2-211ENST00000531041 FIP1L1Q6UN15 594 aaKnown RBP14.14□□□□□ -0.15
SF3B2-211ENST00000531041 OR51T1Q8NGJ9 327 aa14.14□□□□□ -0.15
SF3B2-211ENST00000531041 OR10K1Q8NGX5 313 aa14.14□□□□□ -0.15
SF3B2-211ENST00000531041 MRPS24Q96EL2 167 aaKnown RBP14.14□□□□□ -0.15
SF3B2-211ENST00000531041 PATZ1Q9HBE1 687 aaKnown RBP14.14□□□□□ -0.15
SF3B2-211ENST00000531041 KAAG1Q9UBP8 84 aa14.14□□□□□ -0.15
SF3B2-211ENST00000531041 ZNF222Q9UK12 451 aa14.14□□□□□ -0.15
SF3B2-211ENST00000531041 PCDHB10Q9UN67 800 aa14.14□□□□□ -0.15
SF3B2-211ENST00000531041 IGKV1D-17A0A075B6S4 117 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 SMIM30A4D0T7 59 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 RFPL4AA6NLU0 287 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 RFPL4AL1F8VTS6 287 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 BPNT1O95861 308 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 IGHV2-5P01817 119 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 WNT2P09544 360 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 CLEC2LP0C7M8 214 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 AMY2BP19961 511 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 SERPINA2P20848 420 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 RPS19P39019 145 aaKnown RBP14.13□□□□□ -0.15
SF3B2-211ENST00000531041 SPIN3Q5JUX0 258 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 HES5Q5TA89 166 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 LYPD2Q6UXB3 125 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 ZNF788Q6ZQV5 615 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 RAB39BQ96DA2 213 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 IL36RNQ9UBH0 155 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 STEAP1Q9UHE8 339 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 CREBBPQ92793 2442 aa14.13□□□□□ -0.15
SF3B2-211ENST00000531041 F5H0A9 414 aaPredicted RBP14.12□□□□□ -0.15
SF3B2-211ENST00000531041 HEXAP06865 529 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 CALCBP10092 127 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 GTF2F2P13984 249 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 ARSBP15848 533 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 PRDX2P32119 198 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 SERPINB10P48595 397 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 CAV3P56539 151 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 NHLRC3Q5JS37 347 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 SFXN4Q6P4A7 337 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 SLC36A1Q7Z2H8 476 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 OSR2Q8N2R0 312 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 NEIL1Q96FI4 390 aaPredicted RBP14.12□□□□□ -0.15
SF3B2-211ENST00000531041 SDSLQ96GA7 329 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 CST11Q9H112 138 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 ZNF665Q9H7R5 613 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 CEPT1Q9Y6K0 416 aa14.12□□□□□ -0.15
SF3B2-211ENST00000531041 ARHGAP32A7KAX9 2087 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms