RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ZNF708P17019 499 aa14.9□□□□□ -0.02
BRCA2-204ENST00000530893 CLDN18P56856 261 aa14.9□□□□□ -0.02
BRCA2-204ENST00000530893 MALLQ13021 153 aa14.9□□□□□ -0.02
BRCA2-204ENST00000530893 RBM39Q14498 530 aaKnown RBP14.9□□□□□ -0.02
BRCA2-204ENST00000530893 CDCP2Q5VXM1 449 aa14.9□□□□□ -0.02
BRCA2-204ENST00000530893 TMEM211Q6ICI0 200 aa14.9□□□□□ -0.02
BRCA2-204ENST00000530893 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.9□□□□□ -0.02
BRCA2-204ENST00000530893 FBXL14Q8N1E6 418 aa14.9□□□□□ -0.02
BRCA2-204ENST00000530893 Q8NFD4 153 aa14.9□□□□□ -0.02
BRCA2-204ENST00000530893 PIGCQ92535 297 aa14.9□□□□□ -0.02
BRCA2-204ENST00000530893 GALNT14Q96FL9 552 aa14.9□□□□□ -0.02
BRCA2-204ENST00000530893 ZNF286AQ9HBT8 521 aa14.9□□□□□ -0.02
BRCA2-204ENST00000530893 TUBD1Q9UJT1 453 aa14.9□□□□□ -0.02
BRCA2-204ENST00000530893 PCDHB10Q9UN67 800 aa14.9□□□□□ -0.02
BRCA2-204ENST00000530893 DMDP11532 3685 aa14.9□□□□□ -0.02
BRCA2-204ENST00000530893 LNP1A1A4G5 178 aa14.89□□□□□ -0.03
BRCA2-204ENST00000530893 KCNAB3O43448 404 aa14.89□□□□□ -0.03
BRCA2-204ENST00000530893 F10P00742 488 aa14.89□□□□□ -0.03
BRCA2-204ENST00000530893 RBM11P57052 281 aaKnown RBP14.89□□□□□ -0.03
BRCA2-204ENST00000530893 BTN1A1Q13410 526 aa14.89□□□□□ -0.03
BRCA2-204ENST00000530893 PIGYQ3MUY2 71 aa14.89□□□□□ -0.03
BRCA2-204ENST00000530893 EIF5AL1Q6IS14 154 aaKnown RBP14.89□□□□□ -0.03
BRCA2-204ENST00000530893 CPEB3Q8NE35 698 aaKnown RBP14.89□□□□□ -0.03
BRCA2-204ENST00000530893 CNTNAP3BQ96NU0 1288 aa14.89□□□□□ -0.03
BRCA2-204ENST00000530893 IP6K3Q96PC2 410 aa14.89□□□□□ -0.03
BRCA2-204ENST00000530893 SIGLEC12Q96PQ1 595 aa14.89□□□□□ -0.03
BRCA2-204ENST00000530893 CNTNAP3Q9BZ76 1288 aa14.89□□□□□ -0.03
BRCA2-204ENST00000530893 SLC5A7Q9GZV3 580 aa14.89□□□□□ -0.03
BRCA2-204ENST00000530893 SLC7A10Q9NS82 523 aa14.89□□□□□ -0.03
BRCA2-204ENST00000530893 FOXJ2Q9P0K8 574 aa14.89□□□□□ -0.03
BRCA2-204ENST00000530893 CNTRLQ7Z7A1 2325 aa14.89□□□□□ -0.03
BRCA2-204ENST00000530893 MSGN1A6NI15 193 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 ZNF724A8MTY0 619 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 ZNF587BE7ETH6 402 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 SFTPBP07988 381 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 ZNF728P0DKX0 622 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 CD79AP11912 226 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 RRADP55042 308 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 UCP3P55916 312 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 ARF1P84077 181 aaKnown RBP14.88□□□□□ -0.03
BRCA2-204ENST00000530893 IAH1Q2TAA2 248 aaPredicted RBP14.88□□□□□ -0.03
BRCA2-204ENST00000530893 CCDC157Q569K6 752 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 DCAF10Q5QP82 559 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 ZNF585AQ6P3V2 769 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 SPERTQ8NA61 448 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 LHFPL5Q8TAF8 219 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 SLC6A15Q9H2J7 730 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 ACKR4Q9NPB9 350 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 C12orf4Q9NQ89 552 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 COQ3Q9NZJ6 369 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 GSKIPQ9P0R6 139 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 ZDBF2Q9HCK1 2354 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 CDK2AP1O14519 115 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 APOC3P02656 99 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 FUT3P21217 361 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 OPRM1P35372 400 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 PIGPP57054 158 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 SMCO1Q147U7 214 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 OR1C1Q15619 314 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 SAXO1Q8IYX7 474 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 LRTM2Q8N967 370 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 ADAMTS17Q8TE56 1095 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 REPIN1Q9BWE0 567 aaKnown RBP14.88□□□□□ -0.03
BRCA2-204ENST00000530893 SUCNR1Q9BXA5 334 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 TTTY12Q9BZ98 90 aa14.88□□□□□ -0.03
BRCA2-204ENST00000530893 S100A10P60903 97 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 ABCA11PQ4W5N1 156 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 ZNF611Q8N823 705 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 OR1S2Q8NGQ3 325 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 ARL11Q969Q4 196 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 SYT3Q9BQG1 590 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 LIME1Q9H400 295 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 NAA60Q9H7X0 242 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 KMT2EQ8IZD2 1858 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 IGHV3-9P01782 118 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 SP9P0CG40 484 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 PRSS12P56730 875 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 SRYQ05066 204 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 SRSF7Q16629 238 aaKnown RBP eCLIP14.87□□□□□ -0.03
BRCA2-204ENST00000530893 TMEM200AQ86VY9 491 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 BHLHE23Q8NDY6 225 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 BPIFCQ8NFQ6 507 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 ZFP57Q9NU63 452 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 ASF1BQ9NVP2 202 aa14.87□□□□□ -0.03
BRCA2-204ENST00000530893 DEDDO75618 318 aa14.86□□□□□ -0.03
BRCA2-204ENST00000530893 CD59P13987 128 aa14.86□□□□□ -0.03
BRCA2-204ENST00000530893 ITGA3P26006 1051 aa14.86□□□□□ -0.03
BRCA2-204ENST00000530893 GLP1RP43220 463 aa14.86□□□□□ -0.03
BRCA2-204ENST00000530893 RNPS1Q15287 305 aaKnown RBP14.86□□□□□ -0.03
BRCA2-204ENST00000530893 PLA2G2CQ5R387 149 aa14.86□□□□□ -0.03
BRCA2-204ENST00000530893 SLC22A25Q6T423 547 aa14.86□□□□□ -0.03
BRCA2-204ENST00000530893 Q6ZS49 121 aa14.86□□□□□ -0.03
BRCA2-204ENST00000530893 TUSC5Q8IXB3 177 aa14.86□□□□□ -0.03
BRCA2-204ENST00000530893 RTN4IP1Q8WWV3 396 aaPredicted RBP14.86□□□□□ -0.03
BRCA2-204ENST00000530893 APOBEC3DQ96AK3 386 aaPredicted RBP14.86□□□□□ -0.03
BRCA2-204ENST00000530893 SAT2Q96F10 170 aaPredicted RBP14.86□□□□□ -0.03
BRCA2-204ENST00000530893 OPA3Q9H6K4 179 aa14.86□□□□□ -0.03
BRCA2-204ENST00000530893 PQLC2LA1A4F0 135 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 CELA3AP09093 270 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 HKR1P10072 659 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms