RNA–Protein interactions for RNA: ENST00000523323.5

ITGB2-222, Transcript of integrin subunit beta 2, human

TSL 2

Gene ITGB2, Length 2,823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGB2-222	ENST00000523323	MGMT	P16455	207 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	CTSS	P25774	331 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	TNFSF10	P50591	281 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	CXADR	P78310	365 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	GK2	Q14410	553 aa	Predicted RBP	13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	RNF212	Q495C1	297 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	ZFP62	Q8NB50	900 aa	Predicted RBP	13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	BPIFC	Q8NFQ6	507 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	SEMA6D	Q8NFY4	1073 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	SSC4D	Q8WTU2	575 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	RAB3C	Q96E17	227 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	C14orf144	Q96I85	54 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	MEGF10	Q96KG7	1140 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	ADAT1	Q9BUB4	502 aa	Known RBP	13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	CHST5	Q9GZS9	411 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	FN3KRP	Q9HA64	309 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	UPB1	Q9UBR1	384 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	MCTS1	Q9ULC4	181 aa	Known RBP	13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	KLF13	Q9Y2Y9	288 aa	Predicted RBP	13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	TIMM10B	Q9Y5J6	103 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323		V9GYS6	101 aa		13.22	□□□□□ -0.29
ITGB2-222	ENST00000523323	OR2AT4	A6NND4	320 aa		13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323		K7EM74	188 aa		13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	TAF9	Q16594	264 aa		13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	SLC36A1	Q7Z2H8	476 aa		13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	ZNF100	Q8IYN0	542 aa		13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	HS3ST6	Q96QI5	342 aa		13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	VSIG4	Q9Y279	399 aa		13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	DISC1	C4P0D8	188 aa		13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	DNPH1	O43598	174 aa		13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	CELA3B	P08861	270 aa		13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	SCAND1	P57086	179 aa		13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	PIGY	Q3MUY2	71 aa		13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	PUSL1	Q8N0Z8	303 aa	Known RBP	13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	APH1A	Q96BI3	265 aa		13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	TSNAX	Q99598	290 aa	Known RBP	13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	PIPOX	Q9P0Z9	390 aa		13.21	□□□□□ -0.29
ITGB2-222	ENST00000523323	TRGV5	A0A0B4J1U4	118 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	IGKV1-12	A0A0C4DH73	117 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323		A0A0U1RQV5	110 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	GOSR2	O14653	212 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	MSTN	O14793	375 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	EFS	O43281	561 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	IGKV1D-12	P01611	117 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	BLVRB	P30043	206 aa	Predicted RBP	13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	GSK3A	P49840	483 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	FAM3A	P98173	230 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	HOXA4	Q00056	320 aa	Predicted RBP	13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	SMCO1	Q147U7	214 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	PGAP1	Q75T13	922 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	DPPA2	Q7Z7J5	298 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	ADAD2	Q8NCV1	583 aa	Known RBP	13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	RXFP4	Q8TDU9	374 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	WDYHV1	Q96HA8	205 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	TCEAL7	Q9BRU2	100 aa		13.21	□□□□□ -0.3
ITGB2-222	ENST00000523323	TPR	P12270	2363 aa	Known RBP	13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323		A0A1B0GUH1	482 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	RRAD	P55042	308 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	TAS2R19	P59542	299 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	ECH1	Q13011	328 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	ZGRF1	Q86YA3	2104 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	CALHM1	Q8IU99	346 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	MCEMP1	Q8IX19	187 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	DLL3	Q9NYJ7	618 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	TREM2	Q9NZC2	230 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	KIAA2026	Q5HYC2	2103 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	HEATR1	Q9H583	2144 aa	Known RBP	13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	NAP1L6	A6NFF2	107 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	ZNF850	A8MQ14	1090 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	ZNF35	P13682	527 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	ARFRP1	Q13795	201 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	DRAM2	Q6UX65	266 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	NEU1	Q99519	415 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	IL36RN	Q9UBH0	155 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	LHX6	Q9UPM6	363 aa		13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.2	□□□□□ -0.3
ITGB2-222	ENST00000523323		F8VVB4	439 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323		F8VWA3	439 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	UBE2C	O00762	179 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	KCNAB3	O43448	404 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	SFTPB	P07988	381 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	ERCC1	P07992	297 aa	Predicted RBP	13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	ACTB	P60709	375 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	ACTG1	P63261	375 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	MOB3C	Q70IA8	216 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	FGF23	Q9GZV9	251 aa	Predicted RBP	13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	POLE	Q07864	2286 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	PTPRQ	Q9UMZ3	2332 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	OR14I1	A6ND48	311 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	C5orf52	A6NGY3	159 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	CREBL2	O60519	120 aa	Predicted RBP	13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	NPY4R	P50391	375 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	RAB5B	P61020	215 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	RAB1A	P62820	205 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	RPP30	P78346	268 aa	Known RBP	13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	ZNF626	Q68DY1	528 aa		13.19	□□□□□ -0.3
ITGB2-222	ENST00000523323	OR56B2P	Q8NGI1	322 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms