RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 TREM2Q9NZC2 230 aa18.05■□□□□ 0.48
R3HCC1-208ENST00000522012 FBXO9Q9UK97 447 aaPredicted RBP18.05■□□□□ 0.48
R3HCC1-208ENST00000522012 COL12A1Q99715 3063 aa18.05■□□□□ 0.48
R3HCC1-208ENST00000522012 NOS1APO75052 506 aaPredicted RBP18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 SCGNO76038 276 aa18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 RBM11P57052 281 aaKnown RBP18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 TAS2R20P59543 309 aa18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 ERVK11-1P61568 191 aa18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 TLE4Q04727 773 aa18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 TAF9Q16594 264 aa18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 C11orf71Q6IPW1 123 aa18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 RAB12Q6IQ22 244 aa18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 DTX2Q86UW9 622 aa18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 BOLLQ8N9W6 283 aaKnown RBP18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 OR10R2Q8NGX6 335 aa18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 ERGIC1Q969X5 290 aa18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 TRAF4Q9BUZ4 470 aaPredicted RBP18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 PPP1R3CQ9UQK1 317 aa18.04■□□□□ 0.48
R3HCC1-208ENST00000522012 A0A0A6YYH2 397 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 A6NJ64 397 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 RAB27BO00194 218 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 GEMIN2O14893 280 aaKnown RBP18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 WNT9BO14905 357 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 SOCS1O15524 211 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 NR4A2P43354 598 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 PPP5CP53041 499 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 HOXA4Q00056 320 aaPredicted RBP18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 PITPNAQ00169 270 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 ZNF79Q15937 498 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 PYHIN1Q6K0P9 492 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 SNX29P2Q8IUI4 249 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 FAM89BQ8N5H3 189 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 OR11L1Q8NGX0 322 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 OR10Z1Q8NGY1 313 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 IL36RNQ9UBH0 155 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 GLRA1P23415 457 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 PTBP1P26599 531 aaKnown RBP eCLIP18.03■□□□□ 0.482e-6■■■■□ 26
R3HCC1-208ENST00000522012 COL8A1P27658 744 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 BLVRBP30043 206 aaPredicted RBP18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 PTH2RP49190 550 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 PDCD1Q15116 288 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 ABHD1Q96SE0 405 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 CACNG6Q9BXT2 260 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 WDR13Q9H1Z4 485 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 RNF7Q9UBF6 113 aa18.03■□□□□ 0.48
R3HCC1-208ENST00000522012 USP9XQ93008 2570 aaPredicted RBP18.02■□□□□ 0.48
R3HCC1-208ENST00000522012 FLNCQ14315 2725 aa18.02■□□□□ 0.48
R3HCC1-208ENST00000522012 HLA-DQB1P01920 261 aa18.02■□□□□ 0.47
R3HCC1-208ENST00000522012 IRF2P14316 349 aa18.02■□□□□ 0.47
R3HCC1-208ENST00000522012 DUSP1P28562 367 aa18.02■□□□□ 0.47
R3HCC1-208ENST00000522012 CFHR2P36980 270 aa18.02■□□□□ 0.47
R3HCC1-208ENST00000522012 Q8TCH9 128 aa18.02■□□□□ 0.47
R3HCC1-208ENST00000522012 RAB3CQ96E17 227 aa18.02■□□□□ 0.47
R3HCC1-208ENST00000522012 SRRQ9GZT4 340 aa18.02■□□□□ 0.47
R3HCC1-208ENST00000522012 RAB1BQ9H0U4 201 aa18.02■□□□□ 0.47
R3HCC1-208ENST00000522012 ZMAT3Q9HA38 289 aaKnown RBP18.02■□□□□ 0.47
R3HCC1-208ENST00000522012 RABL2AQ9UBK7 228 aaPredicted RBP18.02■□□□□ 0.47
R3HCC1-208ENST00000522012 RABL2BQ9UNT1 228 aa18.02■□□□□ 0.47
R3HCC1-208ENST00000522012 HPXP02790 462 aa18.01■□□□□ 0.47
R3HCC1-208ENST00000522012 PTHLHP12272 177 aa18.01■□□□□ 0.47
R3HCC1-208ENST00000522012 CD40LGP29965 261 aa18.01■□□□□ 0.47
R3HCC1-208ENST00000522012 MNDAP41218 407 aa18.01■□□□□ 0.47
R3HCC1-208ENST00000522012 SCN1BQ07699 218 aa18.01■□□□□ 0.47
R3HCC1-208ENST00000522012 CDNFQ49AH0 187 aa18.01■□□□□ 0.47
R3HCC1-208ENST00000522012 NHLRC3Q5JS37 347 aa18.01■□□□□ 0.47
R3HCC1-208ENST00000522012 FIP1L1Q6UN15 594 aaKnown RBP18.01■□□□□ 0.47
R3HCC1-208ENST00000522012 TGIF2LYQ8IUE0 185 aa18.01■□□□□ 0.47
R3HCC1-208ENST00000522012 SEH1LQ96EE3 360 aa18.01■□□□□ 0.47
R3HCC1-208ENST00000522012 PLEKHF2Q9H8W4 249 aa18.01■□□□□ 0.47
R3HCC1-208ENST00000522012 HES4Q9HCC6 221 aa18.01■□□□□ 0.47
R3HCC1-208ENST00000522012 ZNF581Q9P0T4 197 aa18.01■□□□□ 0.47
R3HCC1-208ENST00000522012 DOPEY2Q9Y3R5 2298 aa18.01■□□□□ 0.47
R3HCC1-208ENST00000522012 LRRC30A6NM36 301 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 OR7C1O76099 320 aaPredicted RBP18■□□□□ 0.47
R3HCC1-208ENST00000522012 CYB5R3P00387 301 aaPredicted RBP18■□□□□ 0.47
R3HCC1-208ENST00000522012 GNB3P16520 340 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 EGR1P18146 543 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 TMEM50BP56557 158 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 IKZF1Q13422 519 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 NKAPLQ5M9Q1 402 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 ACP7Q6ZNF0 438 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 Q6ZTK2 550 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 RTN4RL2Q86UN3 420 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 GCSAMQ8N6F7 178 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 GDPD1Q8N9F7 314 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 C15orf40Q8WUR7 153 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 HPS1Q92902 700 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 ARHGAP5-AS1Q96IT6 56 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 NEDD4LQ96PU5 975 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 NUDT16L1Q9BRJ7 211 aaKnown RBP18■□□□□ 0.47
R3HCC1-208ENST00000522012 RASL12Q9NYN1 266 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 CACNG2Q9Y698 323 aa18■□□□□ 0.47
R3HCC1-208ENST00000522012 SRRM5B3KS81 715 aa17.99■□□□□ 0.47
R3HCC1-208ENST00000522012 LHBP01229 141 aa17.99■□□□□ 0.47
R3HCC1-208ENST00000522012 SMIM21Q3B7S5 101 aa17.99■□□□□ 0.47
R3HCC1-208ENST00000522012 RNASE12Q5GAN4 147 aaKnown RBP17.99■□□□□ 0.47
R3HCC1-208ENST00000522012 PLAC9Q5JTB6 97 aa17.99■□□□□ 0.47
R3HCC1-208ENST00000522012 SIGIRRQ6IA17 410 aa17.99■□□□□ 0.47
R3HCC1-208ENST00000522012 OR8H2Q8N162 312 aa17.99■□□□□ 0.47
R3HCC1-208ENST00000522012 Q8N402 240 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms