RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 NAGKQ9UJ70 344 aa2.84□□□□□ -1.95
SKP1-208ENST00000521216 GUCA1BQ9UMX6 200 aa2.84□□□□□ -1.95
SKP1-208ENST00000521216 SNX24Q9Y343 169 aa2.84□□□□□ -1.95
SKP1-208ENST00000521216 KCNE3Q9Y6H6 103 aa2.84□□□□□ -1.95
SKP1-208ENST00000521216 RGS12O14924 1447 aa2.84□□□□□ -1.96
SKP1-208ENST00000521216 MYOM2P54296 1465 aa2.84□□□□□ -1.96
SKP1-208ENST00000521216 MLH3Q9UHC1 1453 aa2.84□□□□□ -1.96
SKP1-208ENST00000521216 DUOX2Q9NRD8 1548 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 MYH11P35749 1972 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 DIP2AQ14689 1571 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 HECW2Q9P2P5 1572 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 IGLV1-36A0A0B4J1U3 117 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 OR2AT4A6NND4 320 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 LYRM9A8MSI8 78 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 KRBOX1C9JBD0 128 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 H7C2Y5 167 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 KPNA3O00505 521 aaPredicted RBP2.83□□□□□ -1.96
SKP1-208ENST00000521216 ZNF207O43670 478 aaKnown RBP2.83□□□□□ -1.96
SKP1-208ENST00000521216 PLIN3O60664 434 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 RAD1O60671 282 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 YIF1AO95070 293 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 PSMG1O95456 288 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 PPBPP02775 128 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 SLC35E2BP0CK96 405 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 STAG3L2P0CL84 134 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 SLC2A1P11166 492 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 PSKH1P11801 424 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 OGNP20774 298 aaKnown RBP2.83□□□□□ -1.96
SKP1-208ENST00000521216 PTNP21246 168 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 ERP29P30040 261 aaKnown RBP2.83□□□□□ -1.96
SKP1-208ENST00000521216 TGFBR2P37173 567 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 TGM4P49221 684 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 CDC34P49427 236 aaPredicted RBP2.83□□□□□ -1.96
SKP1-208ENST00000521216 ERFP50548 548 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 ACTBP60709 375 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 COPZ1P61923 177 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 ACTG1P63261 375 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 PSPHP78330 225 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 MGAT3Q09327 533 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 BNIP2Q12982 314 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 SRSF5Q13243 272 aaKnown RBP2.83□□□□□ -1.96
SKP1-208ENST00000521216 GPR176Q14439 515 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 TMED2Q15363 201 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 RAET1LQ5VY80 246 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 UGT2A3Q6UWM9 527 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 MRPL52Q86TS9 123 aaKnown RBP2.83□□□□□ -1.96
SKP1-208ENST00000521216 DHFR2Q86XF0 187 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 WDFY1Q8IWB7 410 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 STK40Q8N2I9 435 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 COMMD1Q8N668 190 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 ACBD4Q8NC06 268 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 OR4A4PQ8NGN8 299 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 OR5M1Q8NGP8 315 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 OR52P1PQ8NH57 321 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 OR2V1Q8NHB1 315 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 STOML3Q8TAV4 291 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 NDNFQ8TB73 568 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 GALNT14Q96FL9 552 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 CAPZA3Q96KX2 299 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 RNF145Q96MT1 663 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 NEUROG2Q9H2A3 272 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 ARMC7Q9H6L4 198 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 ANKRA2Q9H9E1 313 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 MED9Q9NWA0 146 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 BABAM2Q9NXR7 383 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 POLR3HQ9Y535 204 aaPredicted RBP2.83□□□□□ -1.96
SKP1-208ENST00000521216 HSPE1-MOB4S4R3N1 261 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 NAV1Q8NEY1 1877 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 MYH13Q9UKX3 1938 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 TNS2Q63HR2 1409 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 A2MP01023 1474 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 IQSEC2Q5JU85 1478 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 ARHGAP35Q9NRY4 1499 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 ABCC3O15438 1527 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 ARHGEF12Q9NZN5 1544 aa2.83□□□□□ -1.96
SKP1-208ENST00000521216 TARBP1Q13395 1621 aaKnown RBP2.82□□□□□ -1.96
SKP1-208ENST00000521216 PBRM1Q86U86 1689 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 PDZK1P1A8MUH7 402 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 CLDN25C9JDP6 229 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 TMEM238C9JI98 176 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 C9JVG2 144 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 G3V2T6 193 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 SULT1C2O00338 296 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 CDC40O60508 579 aaKnown RBP eCLIP2.82□□□□□ -1.96
SKP1-208ENST00000521216 GATBO75879 557 aaKnown RBP2.82□□□□□ -1.96
SKP1-208ENST00000521216 SNAPC5O75971 98 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 SLC22A5O76082 557 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 SNAI1O95863 264 aaPredicted RBP2.82□□□□□ -1.96
SKP1-208ENST00000521216 PTTG1O95997 202 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 IGLV3-19P01714 112 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 FTH1P02794 183 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 CD5P06127 495 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 OR8G3PP0DMU2 310 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 C1GALT1C1LP0DN25 315 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 OR1E1P30953 314 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 ARR3P36575 388 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 OPRK1P41145 380 aa2.82□□□□□ -1.96
SKP1-208ENST00000521216 RPL35P42766 123 aaKnown RBP2.82□□□□□ -1.96
SKP1-208ENST00000521216 RBP2P50120 134 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms