RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 EPG5Q9HCE0 2579 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 BRWD1Q9NSI6 2320 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 MYLKQ15746 1914 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 A0A0J9YYE9 177 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 ZNF98A6NK75 572 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 GJE1A6NN92 205 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 BCKDKO14874 412 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 CHMP2AO43633 222 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 AIREO43918 545 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 OR2B3O76000 313 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 OR5F1O95221 314 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 NPPAP01160 153 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 HLA-DQB1P01920 261 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 IL1RNP18510 177 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 CPN2P22792 545 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 TUBG1P23258 451 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 PSMB9P28065 219 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 SDC4P31431 198 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 TGFBR1P36897 503 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 SLC1A2P43004 574 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 FGF8P55075 233 aaPredicted RBP5.19□□□□□ -1.58
LSM1-202ENST00000520286 LSM3P62310 102 aaKnown RBP5.19□□□□□ -1.58
LSM1-202ENST00000520286 POLR2GP62487 172 aaKnown RBP eCLIP5.19□□□□□ -1.58
LSM1-202ENST00000520286 RAB11AP62491 216 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 EMX2Q04743 252 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 REG3AQ06141 175 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 TWF1Q12792 350 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 RAB11BQ15907 218 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 MLIPQ5VWP3 458 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 OR52W1Q6IF63 320 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 YIPF7Q8N8F6 280 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 OR5K1Q8NHB7 308 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 KCTD4Q8WVF5 259 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 ECHDC3Q96DC8 303 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 PITX2Q99697 317 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 ACTR3CQ9C0K3 210 aaPredicted RBP5.19□□□□□ -1.58
LSM1-202ENST00000520286 SRRQ9GZT4 340 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 SLC22A4Q9H015 551 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 CLMPQ9H6B4 373 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 RETNQ9HD89 108 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 PXMP2Q9NR77 195 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 TUBG2Q9NRH3 451 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 CACNG2Q9Y698 323 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 CHD8Q9HCK8 2581 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 CACNA1BQ00975 2339 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 DCHS1Q96JQ0 3298 aa5.19□□□□□ -1.58
LSM1-202ENST00000520286 ZFHX4Q86UP3 3567 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 OR6C70A6NIJ9 312 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 G3V2T6 193 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 I3L521 148 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 SULT1B1O43704 296 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 TDGF1P13385 188 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 MGMTP16455 207 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 GGT1P19440 569 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 MAGP20916 626 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 GADD45AP24522 165 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 MYL9P24844 172 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 EVI2BP34910 448 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 CA5AP35218 305 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 HAAOP46952 286 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 TDGF1P3P51864 188 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 RAB25P57735 213 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 RPS21P63220 83 aaKnown RBP5.18□□□□□ -1.58
LSM1-202ENST00000520286 CRADDP78560 199 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 FLI1Q01543 452 aaPredicted RBP5.18□□□□□ -1.58
LSM1-202ENST00000520286 RCAN2Q14206 197 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 PRPSAP1Q14558 356 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 CLINT1Q14677 625 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 MAD2L1BPQ15013 274 aaPredicted RBP5.18□□□□□ -1.58
LSM1-202ENST00000520286 ANGPT1Q15389 498 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 ZNF79Q15937 498 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 BEX5Q5H9J7 111 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 GEMIN6Q8WXD5 167 aaKnown RBP5.18□□□□□ -1.58
LSM1-202ENST00000520286 POP5Q969H6 163 aaKnown RBP5.18□□□□□ -1.58
LSM1-202ENST00000520286 KIAA1143Q96AT1 154 aaPredicted RBP5.18□□□□□ -1.58
LSM1-202ENST00000520286 L3HYPDHQ96EM0 354 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 HYLS1Q96M11 299 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 P2RX4Q99571 388 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 C6orf62Q9GZU0 229 aaPredicted RBP5.18□□□□□ -1.58
LSM1-202ENST00000520286 POMKQ9H5K3 350 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 CYP3A43Q9HB55 503 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 FAM49BQ9NUQ9 324 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 MED9Q9NWA0 146 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 SCN3BQ9NY72 215 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 GLS2Q9UI32 602 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 BTRCQ9Y297 605 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 ACOT9Q9Y305 439 aa5.18□□□□□ -1.58
LSM1-202ENST00000520286 GBF1Q92538 1859 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 NCOR2Q9Y618 2525 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 A0A1W2PP18 115 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 A0A1W2PRG6 482 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 A8MT66 165 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 WISP3O95389 354 aaPredicted RBP5.17□□□□□ -1.58
LSM1-202ENST00000520286 FADS2O95864 444 aaKnown RBP5.17□□□□□ -1.58
LSM1-202ENST00000520286 MOSP00540 346 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 UBCP0CG48 685 aaKnown RBP5.17□□□□□ -1.58
LSM1-202ENST00000520286 RAB3AP20336 220 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 F8A1P23610 371 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 OR4D2P58180 307 aa5.17□□□□□ -1.58
LSM1-202ENST00000520286 NUTF2P61970 127 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms