RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 MPPED2Q15777 294 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 CLEC12BQ2HXU8 276 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF626Q68DY1 528 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 FIP1L1Q6UN15 594 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 SPNS3Q6ZMD2 512 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 GLDNQ6ZMI3 551 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 Q6ZTK2 550 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 TMUB2Q71RG4 321 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 LINC00346Q8IVM7 164 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 CDH26Q8IXH8 852 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 MUC20Q8N307 709 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 OR51G2Q8NGK0 314 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 KLF14Q8TD94 323 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 PCNPQ8WW12 178 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 PHYHIPQ92561 330 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 DACT3Q96B18 629 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 C10orf35Q96D05 121 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 HAVCR1Q96D42 359 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 RAB39BQ96DA2 213 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 MRPS24Q96EL2 167 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 CXorf58Q96LI9 332 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 TSSK2Q96PF2 358 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 ABHD6Q9BV23 337 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 ALG8Q9BVK2 526 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 RTL8AQ9BWD3 113 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 SLC25A32Q9H2D1 315 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 CHODLQ9H9P2 273 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 FN3KRPQ9HA64 309 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 HRASLSQ9HDD0 168 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 CKLFQ9UBR5 152 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 IL19Q9UHD0 177 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 SPATA2Q9UM82 520 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 MPC1Q9Y5U8 109 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 LHFPL6Q9Y693 200 aa4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 SIRT4Q9Y6E7 314 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 SPENQ96T58 3664 aaKnown RBP4.84□□□□□ -1.63
CTNNA1-220ENST00000520260 CENPEQ02224 2701 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 RELNP78509 3460 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 IGHV1-69-2A0A0G2JMI3 117 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 A0A0U1RQV5 110 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 TMEM210A6NLX4 147 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 IQCF6A8MYZ5 107 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 GABARAPH6UMI1 98 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 OGG1O15527 345 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 MT-ND4P03905 459 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 IFNA4P05014 189 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 ADH4P08319 380 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 CELA3BP08861 270 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 SBK2P0C263 348 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 PATE4P0C8F1 98 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 UBBP0CG47 229 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 DAOP14920 347 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 ZNF20P17024 532 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 RAB3BP20337 219 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 GDNFP39905 211 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 RPS27AP62979 156 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 UBA52P62987 128 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 TNFAIP6P98066 277 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 SPOCK1Q08629 439 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 INSL4Q14641 139 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 CNN3Q15417 329 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 MEP1BQ16820 701 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 SWI5Q1ZZU3 235 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 MICBQ29980 383 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 GFOD2Q3B7J2 385 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 UBE2NLQ5JXB2 153 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 TMEM244Q5VVB8 128 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 DMKNQ6E0U4 476 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 CORO6Q6QEF8 472 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 UQCC3Q6UW78 93 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 GSG1LQ6UXU4 331 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 DOK3Q7L591 496 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 CEACAM19Q7Z692 300 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 TMEM17Q86X19 198 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 ZNF584Q8IVC4 421 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 SYS1Q8N2H4 156 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 LINC00469Q8N7U9 141 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 BEST4Q8NFU0 473 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 OR8G5Q8NG78 346 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 OR51L1Q8NGJ5 315 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 OR1S1Q8NH92 325 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 SLC25A40Q8TBP6 338 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 C15orf40Q8WUR7 153 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 PP6455Q8WZ26 134 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 CMBLQ96DG6 245 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 MARS2Q96GW9 593 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 REEP6Q96HR9 211 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 OR8B4Q96RC9 309 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 SYT3Q9BQG1 590 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 OCSTAMPQ9BR26 566 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 ADAT1Q9BUB4 502 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 MRI1Q9BV20 369 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 KRTAP17-1Q9BYP8 105 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 OR2J1Q9GZK6 312 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 MS4A7Q9GZW8 240 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 CXXC4Q9H2H0 198 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 OR51B6Q9H340 312 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 COA4Q9NYJ1 87 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 GNG8Q9UK08 70 aa4.83□□□□□ -1.64
CTNNA1-220ENST00000520260 SLC7A11Q9UPY5 501 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms