RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 GPX6P59796 221 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 GRB2P62993 217 aaKnown RBP-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 PSG9Q00887 426 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 ZYG11AQ6WRX3 759 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 C1orf122Q6ZSJ8 110 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 KCTD9Q7L273 389 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 H2BFWTQ7Z2G1 175 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 ZNF410Q86VK4 478 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 DRAXINQ8NBI3 349 aaPredicted RBP-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 DQX1Q8TE96 717 aaKnown RBP-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 TNFAIP8L1Q8WVP5 186 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 FAM3CQ92520 227 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 SH3YL1Q96HL8 342 aaPredicted RBP-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 ACAT2Q9BWD1 397 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 GSDMCQ9BYG8 508 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 TLNRD1Q9H1K6 362 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 CCDC68Q9H2F9 335 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 ING4Q9UNL4 249 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 TTLL3Q9Y4R7 772 aa-2.99□□□□□ -2.89
RNU6-539P-201ENST00000516665 CARMIL1Q5VZK9 1371 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 PCNX1Q96RV3 2341 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 IGHV6-1A0A0B4J1U7 121 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 ARGFXA6NJG6 315 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 RGS5O15539 181 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 FCMRO60667 390 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 RAD1O60671 282 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 CTNSO60931 367 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 GPR75O95800 540 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 MT-ND3P03897 115 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 GNA11P29992 359 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 CD200P41217 278 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 FBXW4P57775 412 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 SCN1BQ07699 218 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 KLRB1Q12918 225 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 TMEM241Q24JQ0 296 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 C1orf185Q5T7R7 199 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 TMEM236Q5W0B7 351 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 FAM19A5Q7Z5A7 132 aaPredicted RBP-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 KIF2BQ8N4N8 673 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 ANKFN1Q8N957 763 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 OR5J2Q8NH18 312 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 SLC13A3Q8WWT9 602 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 TOP1MTQ969P6 601 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 CXorf40BQ96DE9 158 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 C14orf79Q96F83 325 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 ERMAPQ96PL5 475 aaPredicted RBP-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 ALS2CR12Q96Q35 445 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 GABRG3Q99928 467 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 SLC39A3Q9BRY0 314 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 ANKRD60Q9BZ19 345 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 MFFQ9GZY8 342 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 BLOC1S4Q9NUP1 217 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 SDAD1Q9NVU7 687 aaKnown RBP eCLIP-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 CNIH4Q9P003 139 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 GTF2A1LQ9UNN4 478 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 PHLDA3Q9Y5J5 127 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 MIA3Q5JRA6 1907 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 CNTNAP1P78357 1384 aa-3□□□□□ -2.89
RNU6-539P-201ENST00000516665 FHOD3Q2V2M9 1422 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 SMIM30A4D0T7 59 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 LRRIQ3A6PVS8 624 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 H0YC42 278 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 DIRAS1O95057 198 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 PLEKHA8P1O95397 391 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 GABRA1P14867 456 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 TAS2R20P59543 309 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 OR8G1Q15617 311 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 TMEM95Q3KNT9 176 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 CLEC12AQ5QGZ9 265 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 KCNIP4Q6PIL6 250 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 ANGPTL8Q6UXH0 198 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 MBOAT2Q6ZWT7 520 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 UMODL1-AS1Q8N2C9 162 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 OR2A1Q8NGT9 310 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 RXFP2Q8WXD0 754 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 RSPH1Q8WYR4 309 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 TMEM230Q96A57 120 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 SERPINI1Q99574 410 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 COPS8Q99627 209 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 SLF1Q9BQI6 1058 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 ADPGKQ9BRR6 497 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 SMDT1Q9H4I9 107 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 KLK9Q9UKQ9 250 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 B9D1Q9UPM9 204 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 SYNRGQ9UMZ2 1314 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 LAMC1P11047 1609 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 PTPRSQ13332 1948 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 CEP192Q8TEP8 1941 aa-3.01□□□□□ -2.89
RNU6-539P-201ENST00000516665 LAMC3Q9Y6N6 1575 aa-3.02□□□□□ -2.89
RNU6-539P-201ENST00000516665 TRAV1-1A0A0B4J248 108 aa-3.02□□□□□ -2.89
RNU6-539P-201ENST00000516665 TRAV8-6A0A0B4J262 113 aa-3.02□□□□□ -2.89
RNU6-539P-201ENST00000516665 TRIM64A6NGJ6 449 aa-3.02□□□□□ -2.89
RNU6-539P-201ENST00000516665 OR5H14A6NHG9 310 aa-3.02□□□□□ -2.89
RNU6-539P-201ENST00000516665 TRIM64BA6NI03 449 aa-3.02□□□□□ -2.89
RNU6-539P-201ENST00000516665 RAMP3O60896 148 aa-3.02□□□□□ -2.89
RNU6-539P-201ENST00000516665 C1orf105O95561 183 aa-3.02□□□□□ -2.89
RNU6-539P-201ENST00000516665 AKT2P31751 481 aa-3.02□□□□□ -2.89
RNU6-539P-201ENST00000516665 KIF5BP33176 963 aa-3.02□□□□□ -2.89
RNU6-539P-201ENST00000516665 SNU13P55769 128 aaKnown RBP-3.02□□□□□ -2.89
RNU6-539P-201ENST00000516665 OR4D2P58180 307 aa-3.02□□□□□ -2.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms