RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 FBXO8Q9NRD0 319 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 NRBP2Q9NSY0 501 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 FAM49BQ9NUQ9 324 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 RMND1Q9NWS8 449 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 RPS6KB2Q9UBS0 482 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 ATG2BQ96BY7 2078 aa3.38□□□□□ -1.87
RFC1-216ENST00000514572 CFAP46Q8IYW2 2715 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 PIEZO2Q9H5I5 2752 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 HECTD1Q9ULT8 2610 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 ANKRD20A5PA0PJZ0 165 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 KLLNB2CW77 178 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 LINC01619G3V211 115 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 H0Y9J4 135 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 K7EN84 100 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 RAD1O60671 282 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 CA11O75493 328 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 SC5DO75845 299 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 GABARAPO95166 117 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 HOXA9P31269 272 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 MLF1P58340 268 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 TAS2R60P59551 318 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 RPL31P62899 125 aaKnown RBP3.37□□□□□ -1.87
RFC1-216ENST00000514572 CACNG7P62955 275 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 ERCC8Q13216 396 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 HTR4Q13639 388 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 IRF4Q15306 451 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 OR1Q1Q15612 314 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 TAL2Q16559 108 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 ZNF433Q8N7K0 673 aaPredicted RBP3.37□□□□□ -1.87
RFC1-216ENST00000514572 GPR26Q8NDV2 337 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 OR51A7Q8NH64 312 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 OR52A5Q9H2C5 316 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 TREM1Q9NP99 234 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 RRAGDQ9NQL2 400 aaPredicted RBP3.37□□□□□ -1.87
RFC1-216ENST00000514572 ZNF331Q9NQX6 463 aaPredicted RBP3.37□□□□□ -1.87
RFC1-216ENST00000514572 CTSFQ9UBX1 484 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 POFUT2Q9Y2G5 429 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 SIGLEC9Q9Y336 463 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 CABIN1Q9Y6J0 2220 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 PTPN13Q12923 2485 aa3.37□□□□□ -1.87
RFC1-216ENST00000514572 RP1L1Q8IWN7 2480 aaPredicted RBP3.36□□□□□ -1.87
RFC1-216ENST00000514572 NUP205Q92621 2012 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 IGHV1-69DA0A0B4J2H0 117 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 WI2-2373I1.2A0A1W2PRP0 233 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 PINLYPA6NC86 204 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 OR6C74A6NCV1 312 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 IQCF5A8MTL0 148 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 TRIM49D1C9J1S8 452 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 GATCO43716 136 aaKnown RBP3.36□□□□□ -1.87
RFC1-216ENST00000514572 SEMA3DO95025 777 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 CST4P01036 141 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 ADRB3P13945 408 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 MYL9P24844 172 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 SSTR5P35346 364 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 SPAM1P38567 509 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 RBM34P42696 430 aaKnown RBP3.36□□□□□ -1.87
RFC1-216ENST00000514572 CCR6P51684 374 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 GFERP55789 205 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 ARG2P78540 354 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 ITGB3BPQ13352 177 aaPredicted RBP3.36□□□□□ -1.87
RFC1-216ENST00000514572 DYNC1I2Q13409 638 aaKnown RBP3.36□□□□□ -1.87
RFC1-216ENST00000514572 MAD2L1BPQ15013 274 aaPredicted RBP3.36□□□□□ -1.87
RFC1-216ENST00000514572 UBE2SQ16763 222 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 ORMDL2Q53FV1 153 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 DUPD1Q68J44 220 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 CYB5R2Q6BCY4 276 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 PIFOQ8TCI5 191 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 EXOSC8Q96B26 276 aaKnown RBP3.36□□□□□ -1.87
RFC1-216ENST00000514572 CLDN23Q96B33 292 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 HAUS1Q96CS2 278 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 OR2A5Q96R48 311 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 GABRG3Q99928 467 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 KCNS3Q9BQ31 491 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 MYOZ1Q9NP98 299 aaPredicted RBP3.36□□□□□ -1.87
RFC1-216ENST00000514572 CLEC2DQ9UHP7 191 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 GMEB1Q9Y692 573 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 COL6A6A6NMZ7 2263 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 TRIP11Q15643 1979 aa3.36□□□□□ -1.87
RFC1-216ENST00000514572 NOTCH2Q04721 2471 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 ZNF638Q14966 1978 aaKnown RBP3.35□□□□□ -1.87
RFC1-216ENST00000514572 TRBV6-6A0A0A6YYG2 114 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 A0A0U1RQV1 116 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 RAB19A4D1S5 217 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 CDC40O60508 579 aaKnown RBP eCLIP3.35□□□□□ -1.87
RFC1-216ENST00000514572 SMC2O95347 1197 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 CCNE2O96020 404 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 RHOCP08134 193 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 IGHV1-8P0DP01 117 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 HTR1DP28221 377 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 CXCL12P48061 93 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 ST3GAL4Q11206 333 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 FAHD1Q6P587 224 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 EPGNQ6UW88 154 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 NKAIN4Q8IVV8 208 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 SPAG16Q8N0X2 631 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 C19orf18Q8NEA5 215 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 OR10Z1Q8NGY1 313 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 OR10G6Q8NH81 332 aa3.35□□□□□ -1.87
RFC1-216ENST00000514572 CCDC12Q8WUD4 166 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms