RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 SERPINB8P50452 374 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 ERVK-25P63136 954 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 HOXC5Q00444 222 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 MAPK11Q15759 364 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 HIST3H3Q16695 136 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 DYNAPQ8N1N2 210 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 KRTCAP2Q8N6L1 136 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 OR8G5Q8NG78 346 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 OR13G1Q8NGZ3 307 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 ACTRT1Q8TDG2 376 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 L3HYPDHQ96EM0 354 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 LINC00167Q96N53 147 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 PAFAH2Q99487 392 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 RMND5AQ9H871 391 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 SIAEQ9HAT2 523 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 ELOVL3Q9HB03 270 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 ANAPC11Q9NYG5 84 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 MRPL15Q9P015 296 aaKnown RBP4.56□□□□□ -1.68
USP53-206ENST00000510737 TMEM216Q9P0N5 145 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 VSIG4Q9Y279 399 aa4.56□□□□□ -1.68
USP53-206ENST00000510737 MUC4Q99102 2169 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 A0A1B0GWJ7 208 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 VGLL3A8MV65 326 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 K7EQD1 137 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 SLC28A1O00337 649 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 HMGN4O00479 90 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 LSM1O15116 133 aaKnown RBP4.55□□□□□ -1.68
USP53-206ENST00000510737 NDUFA2O43678 99 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 DEDDO75618 318 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 BGLAPP02818 100 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 SERPINE1P05121 402 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 HCKP08631 526 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 PGA4P0DJD7 388 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 PGA3P0DJD8 388 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 GSTM3P21266 225 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 TUBG1P23258 451 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 RAD23AP54725 363 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 RPL38P63173 70 aaKnown RBP4.55□□□□□ -1.68
USP53-206ENST00000510737 DR1Q01658 176 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 PUDPQ08623 228 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 KCNJ8Q15842 424 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 UAP1Q16222 522 aaPredicted RBP4.55□□□□□ -1.68
USP53-206ENST00000510737 C9orf66Q5T8R8 295 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 PRAMEF6Q5VXH4 476 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 OR2T2Q6IF00 324 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 ZNF836Q6ZNA1 936 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 LRRC74BQ6ZQY2 392 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 SLC35D2Q76EJ3 337 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 EGFL6Q8IUX8 553 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 RIMKLAQ8IXN7 391 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 KLHL7Q8IXQ5 586 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 NATD1Q8N6N6 113 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 OR51D1Q8NGF3 324 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 OR4X2Q8NGF9 303 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 OR52H1Q8NGJ2 320 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 SLC38A4Q969I6 547 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 NABP1Q96AH0 204 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 SAT2Q96F10 170 aaPredicted RBP4.55□□□□□ -1.68
USP53-206ENST00000510737 SLC25A44Q96H78 314 aaPredicted RBP4.55□□□□□ -1.68
USP53-206ENST00000510737 TRNT1Q96Q11 434 aaKnown RBP4.55□□□□□ -1.68
USP53-206ENST00000510737 OR2H1Q9GZK4 316 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 MEAF6Q9HAF1 191 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 CCNB1IP1Q9NPC3 277 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 TUBG2Q9NRH3 451 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 UFSP2Q9NUQ7 469 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 MRPL39Q9NYK5 338 aaKnown RBP4.55□□□□□ -1.68
USP53-206ENST00000510737 KAAG1Q9UBP8 84 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 UGT2A1Q9Y4X1 527 aa4.55□□□□□ -1.68
USP53-206ENST00000510737 IGHV3OR15-7A0A075B7D8 119 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 IGKV1D-43A0A0B4J1Z2 117 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 TRAV38-1A0A0B4J264 116 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 TRBV5-5A0A0J9YX44 114 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 EXOC1LA0A1B0GW35 172 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 OOEPA6NGQ2 149 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 C11orf98E9PRG8 122 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 EIF3HO15372 352 aaKnown RBP eCLIP4.54□□□□□ -1.68
USP53-206ENST00000510737 NXPH4O95158 308 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 LINC00032P0C843 101 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 HPCAL1P37235 193 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 MAGEA4P43358 317 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 SLC15A1P46059 708 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 CEBPDP49716 269 aaPredicted RBP4.54□□□□□ -1.68
USP53-206ENST00000510737 ZNF133P52736 654 aaPredicted RBP4.54□□□□□ -1.68
USP53-206ENST00000510737 RPL23AP62750 156 aaKnown RBP4.54□□□□□ -1.68
USP53-206ENST00000510737 GNA13Q14344 377 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 OR8B8Q15620 311 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 SGCAQ16586 387 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 NCR3LG1Q68D85 454 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 REG3GQ6UW15 175 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 LHFPL4Q7Z7J7 247 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 C11orf42Q8N5U0 333 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 THAP8Q8NA92 274 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 OR11L1Q8NGX0 322 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 OR52P1PQ8NH57 321 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 CCL13Q99616 98 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 ECSITQ9BQ95 431 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 MRPL13Q9BYD1 178 aaKnown RBP4.54□□□□□ -1.68
USP53-206ENST00000510737 METTL8Q9H825 291 aaKnown RBP4.54□□□□□ -1.68
USP53-206ENST00000510737 KRT84Q9NSB2 600 aa4.54□□□□□ -1.68
USP53-206ENST00000510737 TMEM100Q9NV29 134 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms